Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC17.93■□□□□ 0.46
LSM6P62312 PGM5P4-201ENST00000421970 445 ntBASIC17.93■□□□□ 0.46
LSM6P62312 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.93■□□□□ 0.46
LSM6P62312 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LSM6P62312 AL162430.1-201ENST00000480705 870 ntBASIC17.93■□□□□ 0.46
LSM6P62312 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LSM6P62312 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LSM6P62312 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LSM6P62312 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.93■□□□□ 0.46
LSM6P62312 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.93■□□□□ 0.46
LSM6P62312 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.93■□□□□ 0.46
LSM6P62312 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LSM6P62312 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LSM6P62312 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LSM6P62312 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LSM6P62312 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LSM6P62312 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
LSM6P62312 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LSM6P62312 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
LSM6P62312 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
LSM6P62312 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.92■□□□□ 0.46
LSM6P62312 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LSM6P62312 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
LSM6P62312 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
LSM6P62312 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC17.92■□□□□ 0.46
LSM6P62312 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC17.92■□□□□ 0.46
LSM6P62312 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC17.92■□□□□ 0.46
LSM6P62312 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC17.92■□□□□ 0.46
LSM6P62312 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LSM6P62312 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
LSM6P62312 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
LSM6P62312 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
LSM6P62312 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
LSM6P62312 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LSM6P62312 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
LSM6P62312 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LSM6P62312 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LSM6P62312 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
LSM6P62312 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.92■□□□□ 0.46
LSM6P62312 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LSM6P62312 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
LSM6P62312 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.92■□□□□ 0.46
LSM6P62312 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
LSM6P62312 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.91■□□□□ 0.46
LSM6P62312 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
LSM6P62312 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LSM6P62312 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.91■□□□□ 0.46
LSM6P62312 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
LSM6P62312 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC17.91■□□□□ 0.46
LSM6P62312 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC17.91■□□□□ 0.46
LSM6P62312 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.91■□□□□ 0.46
LSM6P62312 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LSM6P62312 ME3-201ENST00000323418 1068 ntTSL 5 BASIC17.91■□□□□ 0.46
LSM6P62312 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.91■□□□□ 0.46
LSM6P62312 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.91■□□□□ 0.46
LSM6P62312 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC17.91■□□□□ 0.46
LSM6P62312 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC17.91■□□□□ 0.46
LSM6P62312 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
LSM6P62312 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
LSM6P62312 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LSM6P62312 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
LSM6P62312 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
LSM6P62312 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LSM6P62312 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LSM6P62312 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
LSM6P62312 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LSM6P62312 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
LSM6P62312 AL162377.1-201ENST00000618844 1793 ntBASIC17.91■□□□□ 0.46
LSM6P62312 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LSM6P62312 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC17.91■□□□□ 0.46
LSM6P62312 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.91■□□□□ 0.46
LSM6P62312 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LSM6P62312 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
LSM6P62312 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
LSM6P62312 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
LSM6P62312 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LSM6P62312 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
LSM6P62312 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LSM6P62312 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.9■□□□□ 0.46
LSM6P62312 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
LSM6P62312 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LSM6P62312 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.9■□□□□ 0.46
LSM6P62312 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
LSM6P62312 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
LSM6P62312 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LSM6P62312 DUX4L16-201ENST00000555130 1264 ntBASIC17.9■□□□□ 0.46
LSM6P62312 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
LSM6P62312 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
LSM6P62312 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.9■□□□□ 0.46
LSM6P62312 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LSM6P62312 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LSM6P62312 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.9■□□□□ 0.46
LSM6P62312 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
LSM6P62312 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.89■□□□□ 0.46
LSM6P62312 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LSM6P62312 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LSM6P62312 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LSM6P62312 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
LSM6P62312 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LSM6P62312 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms