Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
CXCR4P61073 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CXCR4P61073 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.58■□□□□ 0.57
CXCR4P61073 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CXCR4P61073 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CXCR4P61073 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
CXCR4P61073 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
CXCR4P61073 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.58■□□□□ 0.56
CXCR4P61073 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.58■□□□□ 0.56
CXCR4P61073 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.58■□□□□ 0.56
CXCR4P61073 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.58■□□□□ 0.56
CXCR4P61073 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CXCR4P61073 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
CXCR4P61073 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CXCR4P61073 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CXCR4P61073 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.57■□□□□ 0.56
CXCR4P61073 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CXCR4P61073 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CXCR4P61073 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.57■□□□□ 0.56
CXCR4P61073 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
CXCR4P61073 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CXCR4P61073 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CXCR4P61073 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CXCR4P61073 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CXCR4P61073 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
CXCR4P61073 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.57■□□□□ 0.56
CXCR4P61073 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC18.57■□□□□ 0.56
CXCR4P61073 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.57■□□□□ 0.56
CXCR4P61073 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.57■□□□□ 0.56
CXCR4P61073 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.57■□□□□ 0.56
CXCR4P61073 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.57■□□□□ 0.56
CXCR4P61073 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CXCR4P61073 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CXCR4P61073 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.57■□□□□ 0.56
CXCR4P61073 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CXCR4P61073 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CXCR4P61073 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
CXCR4P61073 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CXCR4P61073 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.56■□□□□ 0.56
CXCR4P61073 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CXCR4P61073 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CXCR4P61073 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CXCR4P61073 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.56■□□□□ 0.56
CXCR4P61073 BX842568.3-201ENST00000418104 571 ntBASIC18.56■□□□□ 0.56
CXCR4P61073 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CXCR4P61073 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.56■□□□□ 0.56
CXCR4P61073 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC18.56■□□□□ 0.56
CXCR4P61073 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC18.56■□□□□ 0.56
CXCR4P61073 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CXCR4P61073 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.56■□□□□ 0.56
CXCR4P61073 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CXCR4P61073 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CXCR4P61073 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CXCR4P61073 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CXCR4P61073 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CXCR4P61073 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
CXCR4P61073 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CXCR4P61073 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
CXCR4P61073 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CXCR4P61073 AC055733.4-201ENST00000638462 1354 ntBASIC18.55■□□□□ 0.56
CXCR4P61073 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.55■□□□□ 0.56
CXCR4P61073 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CXCR4P61073 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CXCR4P61073 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CXCR4P61073 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CXCR4P61073 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CXCR4P61073 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CXCR4P61073 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.55■□□□□ 0.56
CXCR4P61073 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.55■□□□□ 0.56
CXCR4P61073 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CXCR4P61073 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CXCR4P61073 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.55■□□□□ 0.56
CXCR4P61073 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC18.55■□□□□ 0.56
CXCR4P61073 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.55■□□□□ 0.56
CXCR4P61073 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.55■□□□□ 0.56
CXCR4P61073 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.55■□□□□ 0.56
CXCR4P61073 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CXCR4P61073 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CXCR4P61073 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.54■□□□□ 0.56
CXCR4P61073 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CXCR4P61073 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.54■□□□□ 0.56
CXCR4P61073 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CXCR4P61073 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CXCR4P61073 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CXCR4P61073 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.54■□□□□ 0.56
CXCR4P61073 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CXCR4P61073 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.54■□□□□ 0.56
CXCR4P61073 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CXCR4P61073 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
CXCR4P61073 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.54■□□□□ 0.56
CXCR4P61073 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CXCR4P61073 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CXCR4P61073 TMEM179-206ENST00000616017 1645 ntBASIC18.54■□□□□ 0.56
CXCR4P61073 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CXCR4P61073 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CXCR4P61073 AC133561.4-201ENST00000566112 224 ntBASIC18.54■□□□□ 0.56
CXCR4P61073 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC18.54■□□□□ 0.56
CXCR4P61073 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.54■□□□□ 0.56
CXCR4P61073 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
CXCR4P61073 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms