Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PMS2P54278 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PMS2P54278 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC21.01■□□□□ 0.95
PMS2P54278 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.01■□□□□ 0.95
PMS2P54278 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PMS2P54278 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.01■□□□□ 0.95
PMS2P54278 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.01■□□□□ 0.95
PMS2P54278 AL020996.1-203ENST00000536896 2307 ntBASIC21.01■□□□□ 0.95
PMS2P54278 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.01■□□□□ 0.95
PMS2P54278 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.01■□□□□ 0.95
PMS2P54278 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PMS2P54278 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PMS2P54278 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PMS2P54278 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PMS2P54278 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PMS2P54278 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PMS2P54278 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC21.01■□□□□ 0.95
PMS2P54278 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PMS2P54278 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PMS2P54278 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PMS2P54278 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PMS2P54278 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
PMS2P54278 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PMS2P54278 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PMS2P54278 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21■□□□□ 0.95
PMS2P54278 FXN-202ENST00000396364 980 ntTSL 5 BASIC21■□□□□ 0.95
PMS2P54278 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21■□□□□ 0.95
PMS2P54278 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21■□□□□ 0.95
PMS2P54278 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21■□□□□ 0.95
PMS2P54278 AC116562.4-201ENST00000641316 2276 ntBASIC21■□□□□ 0.95
PMS2P54278 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
PMS2P54278 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
PMS2P54278 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21■□□□□ 0.95
PMS2P54278 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC21■□□□□ 0.95
PMS2P54278 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.99■□□□□ 0.95
PMS2P54278 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PMS2P54278 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PMS2P54278 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PMS2P54278 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PMS2P54278 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
PMS2P54278 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
PMS2P54278 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PMS2P54278 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.99■□□□□ 0.95
PMS2P54278 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PMS2P54278 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PMS2P54278 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PMS2P54278 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
PMS2P54278 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PMS2P54278 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
PMS2P54278 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PMS2P54278 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PMS2P54278 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PMS2P54278 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.98■□□□□ 0.95
PMS2P54278 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
PMS2P54278 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PMS2P54278 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PMS2P54278 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
PMS2P54278 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.98■□□□□ 0.95
PMS2P54278 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PMS2P54278 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
PMS2P54278 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
PMS2P54278 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PMS2P54278 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PMS2P54278 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PMS2P54278 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
PMS2P54278 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PMS2P54278 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PMS2P54278 AC034268.1-201ENST00000441047 882 ntBASIC20.98■□□□□ 0.95
PMS2P54278 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.98■□□□□ 0.95
PMS2P54278 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PMS2P54278 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.98■□□□□ 0.95
PMS2P54278 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.98■□□□□ 0.95
PMS2P54278 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.98■□□□□ 0.95
PMS2P54278 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PMS2P54278 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
PMS2P54278 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PMS2P54278 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PMS2P54278 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
PMS2P54278 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PMS2P54278 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PMS2P54278 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
PMS2P54278 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PMS2P54278 AC018445.3-201ENST00000624177 1945 ntBASIC20.98■□□□□ 0.95
PMS2P54278 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
PMS2P54278 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.97■□□□□ 0.95
PMS2P54278 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PMS2P54278 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PMS2P54278 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.97■□□□□ 0.95
PMS2P54278 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.97■□□□□ 0.95
PMS2P54278 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
PMS2P54278 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
PMS2P54278 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
PMS2P54278 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.97■□□□□ 0.95
PMS2P54278 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.97■□□□□ 0.95
PMS2P54278 AC126544.1-201ENST00000580842 1059 ntBASIC20.97■□□□□ 0.95
PMS2P54278 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.97■□□□□ 0.95
PMS2P54278 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PMS2P54278 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
PMS2P54278 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
PMS2P54278 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms