Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HCFC1P51610 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
HCFC1P51610 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HCFC1P51610 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HCFC1P51610 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
HCFC1P51610 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HCFC1P51610 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
HCFC1P51610 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
HCFC1P51610 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
HCFC1P51610 AL023875.1-201ENST00000640777 796 ntBASIC17.9■□□□□ 0.46
HCFC1P51610 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HCFC1P51610 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
HCFC1P51610 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
HCFC1P51610 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HCFC1P51610 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
HCFC1P51610 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HCFC1P51610 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
HCFC1P51610 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
HCFC1P51610 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.89■□□□□ 0.46
HCFC1P51610 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.89■□□□□ 0.46
HCFC1P51610 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
HCFC1P51610 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HCFC1P51610 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
HCFC1P51610 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HCFC1P51610 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HCFC1P51610 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
HCFC1P51610 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.89■□□□□ 0.45
HCFC1P51610 KRASP1-201ENST00000407852 552 ntBASIC17.89■□□□□ 0.45
HCFC1P51610 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.89■□□□□ 0.45
HCFC1P51610 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.89■□□□□ 0.45
HCFC1P51610 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.89■□□□□ 0.45
HCFC1P51610 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.89■□□□□ 0.45
HCFC1P51610 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
HCFC1P51610 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
HCFC1P51610 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.89■□□□□ 0.45
HCFC1P51610 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC17.89■□□□□ 0.45
HCFC1P51610 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HCFC1P51610 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HCFC1P51610 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HCFC1P51610 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.88■□□□□ 0.45
HCFC1P51610 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HCFC1P51610 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HCFC1P51610 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.88■□□□□ 0.45
HCFC1P51610 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HCFC1P51610 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.88■□□□□ 0.45
HCFC1P51610 AC010331.1-201ENST00000611423 582 ntBASIC17.88■□□□□ 0.45
HCFC1P51610 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HCFC1P51610 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HCFC1P51610 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
HCFC1P51610 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.88■□□□□ 0.45
HCFC1P51610 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC17.88■□□□□ 0.45
HCFC1P51610 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HCFC1P51610 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.88■□□□□ 0.45
HCFC1P51610 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
HCFC1P51610 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HCFC1P51610 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
HCFC1P51610 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HCFC1P51610 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC17.88■□□□□ 0.45
HCFC1P51610 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC17.88■□□□□ 0.45
HCFC1P51610 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HCFC1P51610 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.88■□□□□ 0.45
HCFC1P51610 PGM5P4-201ENST00000421970 445 ntBASIC17.88■□□□□ 0.45
HCFC1P51610 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
HCFC1P51610 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.88■□□□□ 0.45
HCFC1P51610 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC17.87■□□□□ 0.45
HCFC1P51610 LSR-203ENST00000360798 1963 ntTSL 2 BASIC17.87■□□□□ 0.45
HCFC1P51610 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
HCFC1P51610 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HCFC1P51610 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
HCFC1P51610 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HCFC1P51610 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
HCFC1P51610 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HCFC1P51610 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HCFC1P51610 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.87■□□□□ 0.45
HCFC1P51610 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.87■□□□□ 0.45
HCFC1P51610 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.87■□□□□ 0.45
HCFC1P51610 AC110285.5-201ENST00000611501 352 ntBASIC17.87■□□□□ 0.45
HCFC1P51610 AC120498.8-201ENST00000614275 531 ntBASIC17.87■□□□□ 0.45
HCFC1P51610 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
HCFC1P51610 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
HCFC1P51610 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC17.87■□□□□ 0.45
HCFC1P51610 KRT17P2-201ENST00000300992 1314 ntBASIC17.87■□□□□ 0.45
HCFC1P51610 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC17.87■□□□□ 0.45
HCFC1P51610 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HCFC1P51610 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HCFC1P51610 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HCFC1P51610 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.86■□□□□ 0.45
HCFC1P51610 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.86■□□□□ 0.45
HCFC1P51610 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
HCFC1P51610 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
HCFC1P51610 FAM210CP-201ENST00000445714 574 ntBASIC17.86■□□□□ 0.45
HCFC1P51610 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
HCFC1P51610 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.86■□□□□ 0.45
HCFC1P51610 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.86■□□□□ 0.45
HCFC1P51610 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.86■□□□□ 0.45
HCFC1P51610 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HCFC1P51610 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HCFC1P51610 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.86■□□□□ 0.45
HCFC1P51610 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.86■□□□□ 0.45
HCFC1P51610 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms