Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CSNK1DP48730 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CSNK1DP48730 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CSNK1DP48730 AC083880.1-201ENST00000608266 535 ntBASIC20.54■□□□□ 0.88
CSNK1DP48730 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CSNK1DP48730 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CSNK1DP48730 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CSNK1DP48730 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CSNK1DP48730 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.53■□□□□ 0.88
CSNK1DP48730 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CSNK1DP48730 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CSNK1DP48730 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CSNK1DP48730 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CSNK1DP48730 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CSNK1DP48730 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.53■□□□□ 0.88
CSNK1DP48730 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.53■□□□□ 0.88
CSNK1DP48730 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.53■□□□□ 0.88
CSNK1DP48730 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.53■□□□□ 0.88
CSNK1DP48730 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.53■□□□□ 0.88
CSNK1DP48730 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
CSNK1DP48730 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.53■□□□□ 0.88
CSNK1DP48730 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CSNK1DP48730 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CSNK1DP48730 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CSNK1DP48730 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.53■□□□□ 0.88
CSNK1DP48730 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CSNK1DP48730 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CSNK1DP48730 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.52■□□□□ 0.88
CSNK1DP48730 FP700111.2-201ENST00000619190 1892 ntBASIC20.52■□□□□ 0.88
CSNK1DP48730 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CSNK1DP48730 AL137060.1-201ENST00000618151 2648 ntBASIC20.52■□□□□ 0.88
CSNK1DP48730 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CSNK1DP48730 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CSNK1DP48730 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CSNK1DP48730 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CSNK1DP48730 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CSNK1DP48730 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CSNK1DP48730 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.52■□□□□ 0.88
CSNK1DP48730 AL121603.2-201ENST00000557373 2117 ntBASIC20.52■□□□□ 0.88
CSNK1DP48730 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.52■□□□□ 0.88
CSNK1DP48730 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CSNK1DP48730 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.52■□□□□ 0.88
CSNK1DP48730 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CSNK1DP48730 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.52■□□□□ 0.87
CSNK1DP48730 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CSNK1DP48730 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CSNK1DP48730 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CSNK1DP48730 CLDN5-201ENST00000403084 2357 ntBASIC20.51■□□□□ 0.87
CSNK1DP48730 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CSNK1DP48730 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CSNK1DP48730 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CSNK1DP48730 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.51■□□□□ 0.87
CSNK1DP48730 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.51■□□□□ 0.87
CSNK1DP48730 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CSNK1DP48730 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CSNK1DP48730 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.51■□□□□ 0.87
CSNK1DP48730 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CSNK1DP48730 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.51■□□□□ 0.87
CSNK1DP48730 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CSNK1DP48730 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.51■□□□□ 0.87
CSNK1DP48730 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
CSNK1DP48730 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
CSNK1DP48730 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CSNK1DP48730 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CSNK1DP48730 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.5■□□□□ 0.87
CSNK1DP48730 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.5■□□□□ 0.87
CSNK1DP48730 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CSNK1DP48730 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CSNK1DP48730 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CSNK1DP48730 KRT18P6-201ENST00000555540 1265 ntBASIC20.5■□□□□ 0.87
CSNK1DP48730 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CSNK1DP48730 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CSNK1DP48730 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CSNK1DP48730 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CSNK1DP48730 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CSNK1DP48730 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CSNK1DP48730 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CSNK1DP48730 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.5■□□□□ 0.87
CSNK1DP48730 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CSNK1DP48730 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.5■□□□□ 0.87
CSNK1DP48730 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CSNK1DP48730 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.49■□□□□ 0.87
CSNK1DP48730 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CSNK1DP48730 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CSNK1DP48730 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
CSNK1DP48730 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CSNK1DP48730 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
CSNK1DP48730 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CSNK1DP48730 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.49■□□□□ 0.87
CSNK1DP48730 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.49■□□□□ 0.87
CSNK1DP48730 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.49■□□□□ 0.87
CSNK1DP48730 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.49■□□□□ 0.87
CSNK1DP48730 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.49■□□□□ 0.87
CSNK1DP48730 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.49■□□□□ 0.87
CSNK1DP48730 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CSNK1DP48730 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CSNK1DP48730 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CSNK1DP48730 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CSNK1DP48730 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
CSNK1DP48730 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms