Protein–RNA interactions for Protein: P39956

RPH1, DNA damage-responsive transcriptional repressor RPH1, yeastyeast

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPH1P39956 SEC22YLR268W 645 nt2.43□□□□□ -2.02
RPH1P39956 SIP18YMR175W 240 nt2.43□□□□□ -2.02
RPH1P39956 DGK1YOR311C 873 nt2.43□□□□□ -2.02
RPH1P39956 DPB11YJL090C 2295 nt2.43□□□□□ -2.02
RPH1P39956 SMY2YBR172C 2223 nt2.42□□□□□ -2.02
RPH1P39956 PHO91YNR013C 2685 nt2.42□□□□□ -2.02
RPH1P39956 TIF35YDR429C 825 nt2.42□□□□□ -2.02
RPH1P39956 RPL37AYLR185W 267 nt2.42□□□□□ -2.02
RPH1P39956 YML003WYML003W 873 nt2.42□□□□□ -2.02
RPH1P39956 RPB11YOL005C 363 nt2.42□□□□□ -2.02
RPH1P39956 YOR055WYOR055W 435 nt2.42□□□□□ -2.02
RPH1P39956 ISU1YPL135W 498 nt2.42□□□□□ -2.02
RPH1P39956 ARP8YOR141C 2646 nt2.42□□□□□ -2.02
RPH1P39956 YKU80YMR106C 1890 nt2.41□□□□□ -2.02
RPH1P39956 NUP170YBL079W 4509 nt2.41□□□□□ -2.02
RPH1P39956 YPK1YKL126W 2043 nt2.41□□□□□ -2.02
RPH1P39956 ERG28YER044C 447 nt2.41□□□□□ -2.02
RPH1P39956 YHR139C-AYHR139C-A 312 nt2.41□□□□□ -2.02
RPH1P39956 YJR011CYJR011C 786 nt2.41□□□□□ -2.02
RPH1P39956 BSC3YLR465C 309 nt2.41□□□□□ -2.02
RPH1P39956 YOR192C-CYOR192C-C 237 nt2.41□□□□□ -2.02
RPH1P39956 VTC3YPL019C 2508 nt2.41□□□□□ -2.02
RPH1P39956 PDR11YIL013C 4236 nt2.41□□□□□ -2.02
RPH1P39956 RLI1YDR091C 1827 nt2.4□□□□□ -2.02
RPH1P39956 BOI1YBL085W 2943 nt2.4□□□□□ -2.02
RPH1P39956 MDM32YOR147W 1869 nt2.4□□□□□ -2.03
RPH1P39956 APC11YDL008W 498 nt2.4□□□□□ -2.03
RPH1P39956 TSA2YDR453C 591 nt2.4□□□□□ -2.03
RPH1P39956 SDH7YDR511W 402 nt2.4□□□□□ -2.03
RPH1P39956 YEL018C-AYEL018C-A 534 nt2.4□□□□□ -2.03
RPH1P39956 YGR025WYGR025W 303 nt2.4□□□□□ -2.03
RPH1P39956 LAG1YHL003C 1236 nt2.4□□□□□ -2.03
RPH1P39956 YIL156W-BYIL156W-B 222 nt2.4□□□□□ -2.03
RPH1P39956 YBL071CYBL071C 309 nt2.4□□□□□ -2.03
RPH1P39956 ZEO1YOL109W 342 nt2.4□□□□□ -2.03
RPH1P39956 YBL108WYBL108W 306 nt2.4□□□□□ -2.03
RPH1P39956 PEP12YOR036W 867 nt2.4□□□□□ -2.03
RPH1P39956 snR13snR13 124 nt2.4□□□□□ -2.03
RPH1P39956 NSL1YPL233W 651 nt2.4□□□□□ -2.03
RPH1P39956 YPR197CYPR197C 564 nt2.4□□□□□ -2.03
RPH1P39956 DNF1YER166W 4716 nt2.4□□□□□ -2.03
RPH1P39956 ROY1YMR258C 1662 nt2.4□□□□□ -2.03
RPH1P39956 SAK1YER129W 3429 nt2.4□□□□□ -2.03
RPH1P39956 SCP160YJL080C 3669 nt2.39□□□□□ -2.03
RPH1P39956 YER107W-AYER107W-A 321 nt2.39□□□□□ -2.03
RPH1P39956 PEP8YJL053W 1140 nt2.39□□□□□ -2.03
RPH1P39956 YLR434CYLR434C 384 nt2.39□□□□□ -2.03
RPH1P39956 ERP4YOR016C 624 nt2.39□□□□□ -2.03
RPH1P39956 ORC2YBR060C 1863 nt2.39□□□□□ -2.03
RPH1P39956 SPF1YEL031W 3648 nt2.38□□□□□ -2.03
RPH1P39956 TMN3YER113C 2121 nt2.38□□□□□ -2.03
RPH1P39956 VPS13YLL040C 9435 nt2.38□□□□□ -2.03
RPH1P39956 FYV4YHR059W 393 nt2.38□□□□□ -2.03
RPH1P39956 RPC10YHR143W-A 213 nt2.38□□□□□ -2.03
RPH1P39956 YHR214W-AYHR214W-A 486 nt2.38□□□□□ -2.03
RPH1P39956 YJR140W-AYJR140W-A 150 nt2.38□□□□□ -2.03
RPH1P39956 YKL111CYKL111C 336 nt2.38□□□□□ -2.03
RPH1P39956 YAR068WYAR068W 486 nt2.38□□□□□ -2.03
RPH1P39956 URA10YMR271C 684 nt2.38□□□□□ -2.03
RPH1P39956 YPL185WYPL185W 396 nt2.38□□□□□ -2.03
RPH1P39956 SLM6YBR266C 453 nt2.38□□□□□ -2.03
RPH1P39956 DUG2YBR281C 2637 nt2.38□□□□□ -2.03
RPH1P39956 YEF3YLR249W 3135 nt2.38□□□□□ -2.03
RPH1P39956 NIC96YFR002W 2520 nt2.38□□□□□ -2.03
RPH1P39956 NPR1YNL183C 2373 nt2.38□□□□□ -2.03
RPH1P39956 FIR1YER032W 2631 nt2.38□□□□□ -2.03
RPH1P39956 MSB1YOR188W 3414 nt2.38□□□□□ -2.03
RPH1P39956 SCD5YOR329C 2619 nt2.37□□□□□ -2.03
RPH1P39956 VOA1YGR106C 798 nt2.37□□□□□ -2.03
RPH1P39956 RPS20YHL015W 366 nt2.37□□□□□ -2.03
RPH1P39956 RPS24BYIL069C 408 nt2.37□□□□□ -2.03
RPH1P39956 UBC7YMR022W 498 nt2.37□□□□□ -2.03
RPH1P39956 RPS7BYNL096C 573 nt2.37□□□□□ -2.03
RPH1P39956 PHO2YDL106C 1680 nt2.37□□□□□ -2.03
RPH1P39956 SNX41YDR425W 1878 nt2.37□□□□□ -2.03
RPH1P39956 OSW7YFR039C 1533 nt2.37□□□□□ -2.03
RPH1P39956 COG3YER157W 2406 nt2.37□□□□□ -2.03
RPH1P39956 INO80YGL150C 4470 nt2.36□□□□□ -2.03
RPH1P39956 YNL034WYNL034W 1839 nt2.36□□□□□ -2.03
RPH1P39956 NOP19YGR251W 591 nt2.36□□□□□ -2.03
RPH1P39956 YNL277W-AYNL277W-A 189 nt2.36□□□□□ -2.03
RPH1P39956 YPR039WYPR039W 336 nt2.36□□□□□ -2.03
RPH1P39956 FAR11YNL127W 2862 nt2.36□□□□□ -2.03
RPH1P39956 YOL098CYOL098C 3114 nt2.36□□□□□ -2.03
RPH1P39956 PSD2YGR170W 3417 nt2.36□□□□□ -2.03
RPH1P39956 CSF1YLR087C 8877 nt2.35□□□□□ -2.03
RPH1P39956 YER137W-AYER137W-A 306 nt2.35□□□□□ -2.03
RPH1P39956 YER188C-AYER188C-A 300 nt2.35□□□□□ -2.03
RPH1P39956 YMR31YFR049W 372 nt2.35□□□□□ -2.03
RPH1P39956 PET191YJR034W 327 nt2.35□□□□□ -2.03
RPH1P39956 TIM8YJR135W-A 264 nt2.35□□□□□ -2.03
RPH1P39956 RPS29AYLR388W 171 nt2.35□□□□□ -2.03
RPH1P39956 YBL005W-BYBL005W-B 5268 nt2.35□□□□□ -2.03
RPH1P39956 KRE33YNL132W 3171 nt2.35□□□□□ -2.03
RPH1P39956 TPS2YDR074W 2691 nt2.35□□□□□ -2.03
RPH1P39956 NDD1YOR372C 1665 nt2.34□□□□□ -2.03
RPH1P39956 MSL5YLR116W 1431 nt2.34□□□□□ -2.03
RPH1P39956 SEN54YPL083C 1404 nt2.34□□□□□ -2.03
RPH1P39956 FUS1YCL027W 1539 nt2.34□□□□□ -2.03
RPH1P39956 ATP17YDR377W 306 nt2.34□□□□□ -2.03
Retrieved 100 of 7,029 protein–RNA pairs in 22.2 ms