Protein–RNA interactions for Protein: P39904

VPS52, Vacuolar protein sorting-associated protein 52, yeastyeast

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS52P39904 SRO77YBL106C 3033 nt2.38□□□□□ -2.03
VPS52P39904 GPI19YDR437W 423 nt2.38□□□□□ -2.03
VPS52P39904 PTP3YER075C 2787 nt2.38□□□□□ -2.03
VPS52P39904 NOP19YGR251W 591 nt2.38□□□□□ -2.03
VPS52P39904 RPC10YHR143W-A 213 nt2.38□□□□□ -2.03
VPS52P39904 YKL066WYKL066W 444 nt2.38□□□□□ -2.03
VPS52P39904 snR13snR13 124 nt2.38□□□□□ -2.03
VPS52P39904 YBR085C-AYBR085C-A 258 nt2.38□□□□□ -2.03
VPS52P39904 PUF4YGL014W 2667 nt2.37□□□□□ -2.03
VPS52P39904 YDR239CYDR239C 2364 nt2.37□□□□□ -2.03
VPS52P39904 GEA1YJR031C 4227 nt2.37□□□□□ -2.03
VPS52P39904 YAP6YDR259C 1152 nt2.37□□□□□ -2.03
VPS52P39904 ATP17YDR377W 306 nt2.37□□□□□ -2.03
VPS52P39904 HYP2YEL034W 474 nt2.37□□□□□ -2.03
VPS52P39904 GLC7YER133W 939 nt2.37□□□□□ -2.03
VPS52P39904 YGR025WYGR025W 303 nt2.37□□□□□ -2.03
VPS52P39904 VOA1YGR106C 798 nt2.37□□□□□ -2.03
VPS52P39904 RRF1YHR038W 693 nt2.37□□□□□ -2.03
VPS52P39904 MRPL33YMR286W 261 nt2.37□□□□□ -2.03
VPS52P39904 RPS7BYNL096C 573 nt2.37□□□□□ -2.03
VPS52P39904 ZEO1YOL109W 342 nt2.37□□□□□ -2.03
VPS52P39904 RUD3YOR216C 1455 nt2.37□□□□□ -2.03
VPS52P39904 NIC96YFR002W 2520 nt2.37□□□□□ -2.03
VPS52P39904 RTT10YPL183C 3042 nt2.36□□□□□ -2.03
VPS52P39904 ECM25YJL201W 1800 nt2.36□□□□□ -2.03
VPS52P39904 ESL2YKR096W 3588 nt2.36□□□□□ -2.03
VPS52P39904 YHL009W-AYHL009W-A 1242 nt2.36□□□□□ -2.03
VPS52P39904 YHR032W-AYHR032W-A 180 nt2.36□□□□□ -2.03
VPS52P39904 TIM8YJR135W-A 264 nt2.36□□□□□ -2.03
VPS52P39904 AIM32YML050W 936 nt2.36□□□□□ -2.03
VPS52P39904 ERP4YOR016C 624 nt2.36□□□□□ -2.03
VPS52P39904 YBR012CYBR012C 420 nt2.36□□□□□ -2.03
VPS52P39904 YPR039WYPR039W 336 nt2.36□□□□□ -2.03
VPS52P39904 PDR11YIL013C 4236 nt2.36□□□□□ -2.03
VPS52P39904 BAS1YKR099W 2436 nt2.36□□□□□ -2.03
VPS52P39904 SSE1YPL106C 2082 nt2.35□□□□□ -2.03
VPS52P39904 BNR1YIL159W 4128 nt2.35□□□□□ -2.03
VPS52P39904 GPI8YDR331W 1236 nt2.35□□□□□ -2.03
VPS52P39904 YER188C-AYER188C-A 300 nt2.35□□□□□ -2.03
VPS52P39904 EMC6YLL014W 327 nt2.35□□□□□ -2.03
VPS52P39904 VPS41YDR080W 2979 nt2.35□□□□□ -2.03
VPS52P39904 ISW1YBR245C 3390 nt2.34□□□□□ -2.03
VPS52P39904 IRA2YOL081W 9240 nt2.34□□□□□ -2.03
VPS52P39904 snR76snR76 109 nt2.34□□□□□ -2.03
VPS52P39904 ATG31YDR022C 591 nt2.34□□□□□ -2.03
VPS52P39904 RTR1YER139C 681 nt2.34□□□□□ -2.03
VPS52P39904 HYR1YIR037W 492 nt2.34□□□□□ -2.03
VPS52P39904 YLR287CYLR287C 1068 nt2.34□□□□□ -2.03
VPS52P39904 YMR194C-AYMR194C-A 225 nt2.34□□□□□ -2.03
VPS52P39904 GIN4YDR507C 3429 nt2.34□□□□□ -2.04
VPS52P39904 YDR186CYDR186C 2634 nt2.34□□□□□ -2.04
VPS52P39904 PES4YFR023W 1836 nt2.33□□□□□ -2.04
VPS52P39904 SSN2YDR443C 4263 nt2.33□□□□□ -2.04
VPS52P39904 MRD1YPR112C 2664 nt2.33□□□□□ -2.04
VPS52P39904 PSO2YMR137C 1986 nt2.33□□□□□ -2.04
VPS52P39904 SDH7YDR511W 402 nt2.33□□□□□ -2.04
VPS52P39904 CAJ1YER048C 1176 nt2.33□□□□□ -2.04
VPS52P39904 YOR105WYOR105W 327 nt2.33□□□□□ -2.04
VPS52P39904 ACM1YPL267W 630 nt2.33□□□□□ -2.04
VPS52P39904 BRO1YPL084W 2535 nt2.33□□□□□ -2.04
VPS52P39904 YSW1YBR148W 1830 nt2.33□□□□□ -2.04
VPS52P39904 TOP2YNL088W 4287 nt2.33□□□□□ -2.04
VPS52P39904 TPS2YDR074W 2691 nt2.33□□□□□ -2.04
VPS52P39904 DNL4YOR005C 2835 nt2.32□□□□□ -2.04
VPS52P39904 tT(UGU)Q1tT(UGU)Q1 76 nt2.32□□□□□ -2.04
VPS52P39904 BSC3YLR465C 309 nt2.32□□□□□ -2.04
VPS52P39904 ICY1YMR195W 384 nt2.32□□□□□ -2.04
VPS52P39904 YOR050CYOR050C 348 nt2.32□□□□□ -2.04
VPS52P39904 YPL185WYPL185W 396 nt2.32□□□□□ -2.04
VPS52P39904 TRM7YBR061C 933 nt2.32□□□□□ -2.04
VPS52P39904 MGR1YCL044C 1254 nt2.32□□□□□ -2.04
VPS52P39904 YJL016WYJL016W 1686 nt2.31□□□□□ -2.04
VPS52P39904 YKU80YMR106C 1890 nt2.31□□□□□ -2.04
VPS52P39904 YPK1YKL126W 2043 nt2.31□□□□□ -2.04
VPS52P39904 YDL068WYDL068W 330 nt2.31□□□□□ -2.04
VPS52P39904 YER076W-AYER076W-A 348 nt2.31□□□□□ -2.04
VPS52P39904 YHR139C-AYHR139C-A 312 nt2.31□□□□□ -2.04
VPS52P39904 PET191YJR034W 327 nt2.31□□□□□ -2.04
VPS52P39904 HIT1YJR055W 495 nt2.31□□□□□ -2.04
VPS52P39904 LCL2YLR104W 396 nt2.31□□□□□ -2.04
VPS52P39904 RGM1YMR182C 636 nt2.31□□□□□ -2.04
VPS52P39904 YNL058CYNL058C 951 nt2.31□□□□□ -2.04
VPS52P39904 YBL108WYBL108W 306 nt2.31□□□□□ -2.04
VPS52P39904 PSD2YGR170W 3417 nt2.31□□□□□ -2.04
VPS52P39904 SNX41YDR425W 1878 nt2.31□□□□□ -2.04
VPS52P39904 NUP170YBL079W 4509 nt2.3□□□□□ -2.04
VPS52P39904 SGM1YJR134C 2124 nt2.3□□□□□ -2.04
VPS52P39904 SMY2YBR172C 2223 nt2.3□□□□□ -2.04
VPS52P39904 DUG2YBR281C 2637 nt2.3□□□□□ -2.04
VPS52P39904 PDR1YGL013C 3207 nt2.3□□□□□ -2.04
VPS52P39904 YER068C-AYER068C-A 432 nt2.3□□□□□ -2.04
VPS52P39904 RPS24BYIL069C 408 nt2.3□□□□□ -2.04
VPS52P39904 RPL25YOL127W 429 nt2.3□□□□□ -2.04
VPS52P39904 YBR197CYBR197C 654 nt2.3□□□□□ -2.04
VPS52P39904 GPX2YBR244W 489 nt2.3□□□□□ -2.04
VPS52P39904 GCD10YNL062C 1437 nt2.3□□□□□ -2.04
VPS52P39904 KEL2YGR238C 2649 nt2.29□□□□□ -2.04
VPS52P39904 MKT1YNL085W 2493 nt2.29□□□□□ -2.04
VPS52P39904 NUP82YJL061W 2142 nt2.29□□□□□ -2.04
VPS52P39904 SPC72YAL047C 1869 nt2.29□□□□□ -2.04
Retrieved 100 of 7,029 protein–RNA pairs in 25.7 ms