Protein–RNA interactions for Protein: P39023

RPL3, 60S ribosomal protein L3, humanhuman

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3P39023 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.37■□□□□ 0.69
RPL3P39023 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RPL3P39023 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RPL3P39023 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RPL3P39023 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RPL3P39023 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.37■□□□□ 0.69
RPL3P39023 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.37■□□□□ 0.69
RPL3P39023 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
RPL3P39023 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RPL3P39023 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.37■□□□□ 0.69
RPL3P39023 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RPL3P39023 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.37■□□□□ 0.69
RPL3P39023 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPL3P39023 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPL3P39023 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RPL3P39023 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.36■□□□□ 0.69
RPL3P39023 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RPL3P39023 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
RPL3P39023 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RPL3P39023 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RPL3P39023 AC097381.1-201ENST00000429019 1296 ntBASIC19.36■□□□□ 0.69
RPL3P39023 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RPL3P39023 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPL3P39023 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
RPL3P39023 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.36■□□□□ 0.69
RPL3P39023 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
RPL3P39023 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
RPL3P39023 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPL3P39023 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPL3P39023 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPL3P39023 AL121603.2-201ENST00000557373 2117 ntBASIC19.36■□□□□ 0.69
RPL3P39023 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPL3P39023 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPL3P39023 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RPL3P39023 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPL3P39023 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPL3P39023 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPL3P39023 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.35■□□□□ 0.69
RPL3P39023 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPL3P39023 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPL3P39023 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPL3P39023 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.35■□□□□ 0.69
RPL3P39023 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.35■□□□□ 0.69
RPL3P39023 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RPL3P39023 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.35■□□□□ 0.69
RPL3P39023 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPL3P39023 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RPL3P39023 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPL3P39023 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPL3P39023 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPL3P39023 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
RPL3P39023 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RPL3P39023 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RPL3P39023 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RPL3P39023 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.34■□□□□ 0.69
RPL3P39023 AL512408.1-201ENST00000569378 2000 ntBASIC19.34■□□□□ 0.69
RPL3P39023 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RPL3P39023 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.34■□□□□ 0.69
RPL3P39023 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RPL3P39023 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RPL3P39023 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RPL3P39023 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RPL3P39023 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.34■□□□□ 0.69
RPL3P39023 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RPL3P39023 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
RPL3P39023 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RPL3P39023 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RPL3P39023 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
RPL3P39023 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.34■□□□□ 0.69
RPL3P39023 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RPL3P39023 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.34■□□□□ 0.69
RPL3P39023 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
RPL3P39023 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.34■□□□□ 0.69
RPL3P39023 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RPL3P39023 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
RPL3P39023 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RPL3P39023 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RPL3P39023 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
RPL3P39023 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.33■□□□□ 0.69
RPL3P39023 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RPL3P39023 PGM5P4-201ENST00000421970 445 ntBASIC19.33■□□□□ 0.68
RPL3P39023 MYCNOS-205ENST00000641950 531 ntBASIC19.33■□□□□ 0.68
RPL3P39023 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
RPL3P39023 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.68
RPL3P39023 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RPL3P39023 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RPL3P39023 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
RPL3P39023 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
RPL3P39023 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
RPL3P39023 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RPL3P39023 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RPL3P39023 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
RPL3P39023 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RPL3P39023 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RPL3P39023 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
RPL3P39023 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RPL3P39023 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.32■□□□□ 0.68
RPL3P39023 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.32■□□□□ 0.68
RPL3P39023 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.32■□□□□ 0.68
RPL3P39023 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms