Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SHC1P29353 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SHC1P29353 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SHC1P29353 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SHC1P29353 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SHC1P29353 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SHC1P29353 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SHC1P29353 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SHC1P29353 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SHC1P29353 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SHC1P29353 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SHC1P29353 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.66■□□□□ 0.58
SHC1P29353 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SHC1P29353 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
SHC1P29353 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SHC1P29353 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SHC1P29353 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.66■□□□□ 0.58
SHC1P29353 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.66■□□□□ 0.58
SHC1P29353 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SHC1P29353 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.66■□□□□ 0.58
SHC1P29353 AC007322.1-201ENST00000426983 750 ntBASIC18.66■□□□□ 0.58
SHC1P29353 CROCCP5-201ENST00000436658 830 ntBASIC18.66■□□□□ 0.58
SHC1P29353 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SHC1P29353 AC026185.1-201ENST00000445748 174 ntBASIC18.66■□□□□ 0.58
SHC1P29353 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SHC1P29353 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.66■□□□□ 0.58
SHC1P29353 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.66■□□□□ 0.58
SHC1P29353 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.66■□□□□ 0.58
SHC1P29353 AC231657.2-201ENST00000624556 255 ntBASIC18.66■□□□□ 0.58
SHC1P29353 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SHC1P29353 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SHC1P29353 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SHC1P29353 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SHC1P29353 AC068338.2-201ENST00000563278 1430 ntBASIC18.66■□□□□ 0.58
SHC1P29353 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SHC1P29353 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.65■□□□□ 0.58
SHC1P29353 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SHC1P29353 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SHC1P29353 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SHC1P29353 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SHC1P29353 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SHC1P29353 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SHC1P29353 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SHC1P29353 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SHC1P29353 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
SHC1P29353 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SHC1P29353 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SHC1P29353 MIR663A-201ENST00000385250 93 ntBASIC18.65■□□□□ 0.58
SHC1P29353 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.65■□□□□ 0.58
SHC1P29353 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.65■□□□□ 0.58
SHC1P29353 AC007322.4-201ENST00000509611 723 ntBASIC18.65■□□□□ 0.58
SHC1P29353 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SHC1P29353 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.65■□□□□ 0.58
SHC1P29353 AL050303.2-201ENST00000619798 666 ntBASIC18.65■□□□□ 0.58
SHC1P29353 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
SHC1P29353 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.65■□□□□ 0.58
SHC1P29353 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.65■□□□□ 0.58
SHC1P29353 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.65■□□□□ 0.58
SHC1P29353 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SHC1P29353 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SHC1P29353 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
SHC1P29353 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
SHC1P29353 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
SHC1P29353 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SHC1P29353 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
SHC1P29353 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
SHC1P29353 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SHC1P29353 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.64■□□□□ 0.57
SHC1P29353 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.64■□□□□ 0.57
SHC1P29353 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.64■□□□□ 0.57
SHC1P29353 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.64■□□□□ 0.57
SHC1P29353 AC016405.3-201ENST00000607710 860 ntBASIC18.64■□□□□ 0.57
SHC1P29353 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.64■□□□□ 0.57
SHC1P29353 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.64■□□□□ 0.57
SHC1P29353 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SHC1P29353 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SHC1P29353 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SHC1P29353 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SHC1P29353 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.64■□□□□ 0.57
SHC1P29353 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SHC1P29353 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
SHC1P29353 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SHC1P29353 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
SHC1P29353 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SHC1P29353 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SHC1P29353 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.63■□□□□ 0.57
SHC1P29353 CYP2T1P-201ENST00000432607 1285 ntBASIC18.63■□□□□ 0.57
SHC1P29353 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.63■□□□□ 0.57
SHC1P29353 AC005181.1-201ENST00000604782 1256 ntBASIC18.63■□□□□ 0.57
SHC1P29353 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SHC1P29353 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SHC1P29353 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SHC1P29353 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
SHC1P29353 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
SHC1P29353 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SHC1P29353 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SHC1P29353 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SHC1P29353 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SHC1P29353 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SHC1P29353 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms