Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
GDF1P27539 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.54■□□□□ 0.56
GDF1P27539 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.54■□□□□ 0.56
GDF1P27539 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GDF1P27539 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
GDF1P27539 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GDF1P27539 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.54■□□□□ 0.56
GDF1P27539 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.54■□□□□ 0.56
GDF1P27539 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
GDF1P27539 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.54■□□□□ 0.56
GDF1P27539 AL356652.1-201ENST00000615962 565 ntBASIC18.54■□□□□ 0.56
GDF1P27539 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC18.54■□□□□ 0.56
GDF1P27539 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.54■□□□□ 0.56
GDF1P27539 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
GDF1P27539 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC18.54■□□□□ 0.56
GDF1P27539 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GDF1P27539 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.54■□□□□ 0.56
GDF1P27539 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GDF1P27539 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GDF1P27539 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GDF1P27539 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GDF1P27539 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.54■□□□□ 0.56
GDF1P27539 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
GDF1P27539 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
GDF1P27539 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
GDF1P27539 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
GDF1P27539 AF106564.1-201ENST00000607058 2553 ntBASIC18.53■□□□□ 0.56
GDF1P27539 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
GDF1P27539 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
GDF1P27539 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.53■□□□□ 0.56
GDF1P27539 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.53■□□□□ 0.56
GDF1P27539 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
GDF1P27539 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.53■□□□□ 0.56
GDF1P27539 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.53■□□□□ 0.56
GDF1P27539 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
GDF1P27539 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.53■□□□□ 0.56
GDF1P27539 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.53■□□□□ 0.56
GDF1P27539 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.53■□□□□ 0.56
GDF1P27539 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.53■□□□□ 0.56
GDF1P27539 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
GDF1P27539 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.53■□□□□ 0.56
GDF1P27539 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
GDF1P27539 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
GDF1P27539 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
GDF1P27539 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.52■□□□□ 0.56
GDF1P27539 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
GDF1P27539 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
GDF1P27539 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
GDF1P27539 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.52■□□□□ 0.56
GDF1P27539 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.52■□□□□ 0.56
GDF1P27539 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
GDF1P27539 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
GDF1P27539 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
GDF1P27539 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.52■□□□□ 0.56
GDF1P27539 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
GDF1P27539 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
GDF1P27539 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GDF1P27539 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GDF1P27539 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GDF1P27539 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
GDF1P27539 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.51■□□□□ 0.55
GDF1P27539 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GDF1P27539 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GDF1P27539 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
GDF1P27539 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
GDF1P27539 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GDF1P27539 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
GDF1P27539 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GDF1P27539 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.51■□□□□ 0.55
GDF1P27539 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.51■□□□□ 0.55
GDF1P27539 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.51■□□□□ 0.55
GDF1P27539 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.51■□□□□ 0.55
GDF1P27539 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
GDF1P27539 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.51■□□□□ 0.55
GDF1P27539 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
GDF1P27539 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.51■□□□□ 0.55
GDF1P27539 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.51■□□□□ 0.55
GDF1P27539 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
GDF1P27539 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
GDF1P27539 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GDF1P27539 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.5■□□□□ 0.55
GDF1P27539 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
GDF1P27539 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GDF1P27539 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
GDF1P27539 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
GDF1P27539 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
GDF1P27539 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
GDF1P27539 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
GDF1P27539 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
GDF1P27539 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GDF1P27539 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GDF1P27539 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
GDF1P27539 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.5■□□□□ 0.55
GDF1P27539 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
GDF1P27539 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.5■□□□□ 0.55
GDF1P27539 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
GDF1P27539 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GDF1P27539 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
GDF1P27539 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
GDF1P27539 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms