Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.95■□□□□ 0.62
TNFRSF1BP20333 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TNFRSF1BP20333 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TNFRSF1BP20333 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TNFRSF1BP20333 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TNFRSF1BP20333 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TNFRSF1BP20333 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.94■□□□□ 0.62
TNFRSF1BP20333 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TNFRSF1BP20333 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
TNFRSF1BP20333 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TNFRSF1BP20333 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
TNFRSF1BP20333 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.94■□□□□ 0.62
TNFRSF1BP20333 AC138907.5-202ENST00000569484 235 ntBASIC18.94■□□□□ 0.62
TNFRSF1BP20333 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TNFRSF1BP20333 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
TNFRSF1BP20333 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TNFRSF1BP20333 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TNFRSF1BP20333 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
TNFRSF1BP20333 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
TNFRSF1BP20333 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TNFRSF1BP20333 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TNFRSF1BP20333 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TNFRSF1BP20333 TCF3P1-201ENST00000423021 1937 ntBASIC18.94■□□□□ 0.62
TNFRSF1BP20333 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TNFRSF1BP20333 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
TNFRSF1BP20333 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.93■□□□□ 0.62
TNFRSF1BP20333 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
TNFRSF1BP20333 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TNFRSF1BP20333 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TNFRSF1BP20333 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
TNFRSF1BP20333 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TNFRSF1BP20333 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.93■□□□□ 0.62
TNFRSF1BP20333 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TNFRSF1BP20333 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18.93■□□□□ 0.62
TNFRSF1BP20333 AC142381.2-201ENST00000566120 298 ntBASIC18.93■□□□□ 0.62
TNFRSF1BP20333 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
TNFRSF1BP20333 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.93■□□□□ 0.62
TNFRSF1BP20333 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.93■□□□□ 0.62
TNFRSF1BP20333 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.93■□□□□ 0.62
TNFRSF1BP20333 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
TNFRSF1BP20333 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.93■□□□□ 0.62
TNFRSF1BP20333 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
TNFRSF1BP20333 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TNFRSF1BP20333 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
TNFRSF1BP20333 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TNFRSF1BP20333 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TNFRSF1BP20333 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TNFRSF1BP20333 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
TNFRSF1BP20333 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TNFRSF1BP20333 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TNFRSF1BP20333 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TNFRSF1BP20333 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TNFRSF1BP20333 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
TNFRSF1BP20333 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TNFRSF1BP20333 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TNFRSF1BP20333 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.92■□□□□ 0.62
TNFRSF1BP20333 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.92■□□□□ 0.62
TNFRSF1BP20333 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.92■□□□□ 0.62
TNFRSF1BP20333 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TNFRSF1BP20333 AC245052.3-201ENST00000450182 901 ntBASIC18.92■□□□□ 0.62
TNFRSF1BP20333 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TNFRSF1BP20333 SLC7A5P2-201ENST00000553010 536 ntBASIC18.92■□□□□ 0.62
TNFRSF1BP20333 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.92■□□□□ 0.62
TNFRSF1BP20333 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.92■□□□□ 0.62
TNFRSF1BP20333 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
TNFRSF1BP20333 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TNFRSF1BP20333 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
TNFRSF1BP20333 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
TNFRSF1BP20333 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TNFRSF1BP20333 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TNFRSF1BP20333 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TNFRSF1BP20333 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TNFRSF1BP20333 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
TNFRSF1BP20333 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TNFRSF1BP20333 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.91■□□□□ 0.62
TNFRSF1BP20333 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TNFRSF1BP20333 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TNFRSF1BP20333 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.91■□□□□ 0.62
TNFRSF1BP20333 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TNFRSF1BP20333 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TNFRSF1BP20333 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.91■□□□□ 0.62
TNFRSF1BP20333 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TNFRSF1BP20333 AL139246.5-201ENST00000606645 996 ntBASIC18.91■□□□□ 0.62
TNFRSF1BP20333 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.91■□□□□ 0.62
TNFRSF1BP20333 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
TNFRSF1BP20333 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TNFRSF1BP20333 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TNFRSF1BP20333 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
TNFRSF1BP20333 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.91■□□□□ 0.62
TNFRSF1BP20333 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.91■□□□□ 0.62
TNFRSF1BP20333 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TNFRSF1BP20333 KRT16P2-201ENST00000414673 1423 ntBASIC18.91■□□□□ 0.62
TNFRSF1BP20333 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TNFRSF1BP20333 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
TNFRSF1BP20333 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TNFRSF1BP20333 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TNFRSF1BP20333 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.9■□□□□ 0.62
TNFRSF1BP20333 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.9■□□□□ 0.62
TNFRSF1BP20333 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TNFRSF1BP20333 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms