Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
HIST1H1DP16402 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HIST1H1DP16402 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC17.3■□□□□ 0.36
HIST1H1DP16402 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.3■□□□□ 0.36
HIST1H1DP16402 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC17.3■□□□□ 0.36
HIST1H1DP16402 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC17.3■□□□□ 0.36
HIST1H1DP16402 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HIST1H1DP16402 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HIST1H1DP16402 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HIST1H1DP16402 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.3■□□□□ 0.36
HIST1H1DP16402 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC17.3■□□□□ 0.36
HIST1H1DP16402 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HIST1H1DP16402 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.29■□□□□ 0.36
HIST1H1DP16402 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HIST1H1DP16402 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
HIST1H1DP16402 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
HIST1H1DP16402 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HIST1H1DP16402 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
HIST1H1DP16402 MPST-204ENST00000404393 1329 ntTSL 5 BASIC17.29■□□□□ 0.36
HIST1H1DP16402 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HIST1H1DP16402 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HIST1H1DP16402 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.29■□□□□ 0.36
HIST1H1DP16402 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
HIST1H1DP16402 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HIST1H1DP16402 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
HIST1H1DP16402 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC17.29■□□□□ 0.36
HIST1H1DP16402 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HIST1H1DP16402 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC17.29■□□□□ 0.36
HIST1H1DP16402 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HIST1H1DP16402 RARRES2P11-201ENST00000635158 484 ntBASIC17.29■□□□□ 0.36
HIST1H1DP16402 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HIST1H1DP16402 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.29■□□□□ 0.36
HIST1H1DP16402 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.29■□□□□ 0.36
HIST1H1DP16402 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HIST1H1DP16402 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HIST1H1DP16402 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HIST1H1DP16402 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HIST1H1DP16402 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
HIST1H1DP16402 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
HIST1H1DP16402 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.28■□□□□ 0.36
HIST1H1DP16402 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HIST1H1DP16402 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HIST1H1DP16402 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HIST1H1DP16402 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HIST1H1DP16402 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HIST1H1DP16402 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.28■□□□□ 0.36
HIST1H1DP16402 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HIST1H1DP16402 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HIST1H1DP16402 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HIST1H1DP16402 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
HIST1H1DP16402 AC245052.3-201ENST00000450182 901 ntBASIC17.28■□□□□ 0.36
HIST1H1DP16402 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC17.28■□□□□ 0.36
HIST1H1DP16402 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC17.28■□□□□ 0.36
HIST1H1DP16402 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC17.28■□□□□ 0.36
HIST1H1DP16402 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC17.28■□□□□ 0.36
HIST1H1DP16402 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC17.28■□□□□ 0.36
HIST1H1DP16402 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.28■□□□□ 0.36
HIST1H1DP16402 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
HIST1H1DP16402 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
HIST1H1DP16402 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HIST1H1DP16402 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
HIST1H1DP16402 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HIST1H1DP16402 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HIST1H1DP16402 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HIST1H1DP16402 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
HIST1H1DP16402 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
HIST1H1DP16402 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HIST1H1DP16402 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HIST1H1DP16402 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
HIST1H1DP16402 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
HIST1H1DP16402 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HIST1H1DP16402 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC17.27■□□□□ 0.36
HIST1H1DP16402 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
HIST1H1DP16402 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
HIST1H1DP16402 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC17.27■□□□□ 0.36
HIST1H1DP16402 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC17.27■□□□□ 0.36
HIST1H1DP16402 MIR2861-201ENST00000636310 90 ntBASIC17.27■□□□□ 0.36
HIST1H1DP16402 CPT2-209ENST00000636935 803 ntTSL 5 BASIC17.27■□□□□ 0.36
HIST1H1DP16402 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HIST1H1DP16402 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HIST1H1DP16402 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HIST1H1DP16402 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
HIST1H1DP16402 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.27■□□□□ 0.35
HIST1H1DP16402 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HIST1H1DP16402 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
HIST1H1DP16402 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
HIST1H1DP16402 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.27■□□□□ 0.35
HIST1H1DP16402 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.27■□□□□ 0.35
HIST1H1DP16402 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
HIST1H1DP16402 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
HIST1H1DP16402 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HIST1H1DP16402 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.26■□□□□ 0.35
HIST1H1DP16402 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.26■□□□□ 0.35
HIST1H1DP16402 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HIST1H1DP16402 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HIST1H1DP16402 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
HIST1H1DP16402 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC17.26■□□□□ 0.35
HIST1H1DP16402 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC17.26■□□□□ 0.35
HIST1H1DP16402 AC012414.1-201ENST00000556676 535 ntBASIC17.26■□□□□ 0.35
HIST1H1DP16402 GRAMD4P4-201ENST00000613563 1115 ntBASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms