Protein–RNA interactions for Protein: P04819

CDC9, DNA ligase 1, yeastyeast

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC9P04819 DUG2YBR281C 2637 nt3.02□□□□□ -1.93
CDC9P04819 GCN1YGL195W 8019 nt3.01□□□□□ -1.93
CDC9P04819 RAD2YGR258C 3096 nt3.01□□□□□ -1.93
CDC9P04819 YDL152WYDL152W 366 nt3.01□□□□□ -1.93
CDC9P04819 MZM1YDR493W 372 nt3.01□□□□□ -1.93
CDC9P04819 RPL30YGL030W 318 nt3.01□□□□□ -1.93
CDC9P04819 RPL20AYMR242C 519 nt3.01□□□□□ -1.93
CDC9P04819 ATP3YBR039W 936 nt3.01□□□□□ -1.93
CDC9P04819 PUF6YDR496C 1971 nt3.01□□□□□ -1.93
CDC9P04819 KSP1YHR082C 3090 nt3.01□□□□□ -1.93
CDC9P04819 GCV2YMR189W 3105 nt3□□□□□ -1.93
CDC9P04819 NAN1YPL126W 2691 nt3□□□□□ -1.93
CDC9P04819 YEL057CYEL057C 702 nt3□□□□□ -1.93
CDC9P04819 UTP30YKR060W 825 nt3□□□□□ -1.93
CDC9P04819 YLR012CYLR012C 300 nt3□□□□□ -1.93
CDC9P04819 YLR031WYLR031W 561 nt3□□□□□ -1.93
CDC9P04819 YAF9YNL107W 681 nt3□□□□□ -1.93
CDC9P04819 FMP23YBR047W 528 nt3□□□□□ -1.93
CDC9P04819 ROX1YPR065W 1107 nt3□□□□□ -1.93
CDC9P04819 MET6YER091C 2304 nt3□□□□□ -1.93
CDC9P04819 VPS41YDR080W 2979 nt3□□□□□ -1.93
CDC9P04819 CDC24YAL041W 2565 nt3□□□□□ -1.93
CDC9P04819 FCF2YLR051C 654 nt2.99□□□□□ -1.93
CDC9P04819 YPL182CYPL182C 384 nt2.99□□□□□ -1.93
CDC9P04819 snR42snR42 351 nt2.99□□□□□ -1.93
CDC9P04819 YPR089WYPR089W 2667 nt2.99□□□□□ -1.93
CDC9P04819 ECM21YBL101C 3354 nt2.98□□□□□ -1.93
CDC9P04819 YGL014C-AYGL014C-A 162 nt2.98□□□□□ -1.93
CDC9P04819 RRM3YHR031C 2172 nt2.97□□□□□ -1.93
CDC9P04819 GIN4YDR507C 3429 nt2.97□□□□□ -1.93
CDC9P04819 YDL011CYDL011C 324 nt2.97□□□□□ -1.93
CDC9P04819 YDR413CYDR413C 576 nt2.97□□□□□ -1.93
CDC9P04819 YER121WYER121W 345 nt2.97□□□□□ -1.93
CDC9P04819 YFR056CYFR056C 369 nt2.97□□□□□ -1.93
CDC9P04819 USE1YGL098W 738 nt2.97□□□□□ -1.93
CDC9P04819 FRE2YKL220C 2136 nt2.97□□□□□ -1.93
CDC9P04819 CRS5YOR031W 210 nt2.97□□□□□ -1.93
CDC9P04819 SWT1YOR166C 1377 nt2.97□□□□□ -1.93
CDC9P04819 FIR1YER032W 2631 nt2.96□□□□□ -1.94
CDC9P04819 RSN1YMR266W 2862 nt2.96□□□□□ -1.94
CDC9P04819 VPS64YDR200C 1815 nt2.96□□□□□ -1.94
CDC9P04819 FPR1YNL135C 345 nt2.96□□□□□ -1.94
CDC9P04819 IRC23YOR044W 474 nt2.96□□□□□ -1.94
CDC9P04819 SSN2YDR443C 4263 nt2.96□□□□□ -1.94
CDC9P04819 REV1YOR346W 2958 nt2.96□□□□□ -1.94
CDC9P04819 PCF11YDR228C 1881 nt2.95□□□□□ -1.94
CDC9P04819 NHP2YDL208W 471 nt2.95□□□□□ -1.94
CDC9P04819 YDR102CYDR102C 333 nt2.95□□□□□ -1.94
CDC9P04819 HMF1YER057C 390 nt2.95□□□□□ -1.94
CDC9P04819 YJL202CYJL202C 348 nt2.95□□□□□ -1.94
CDC9P04819 GOT1YMR292W 417 nt2.95□□□□□ -1.94
CDC9P04819 YPR146CYPR146C 330 nt2.95□□□□□ -1.94
CDC9P04819 PTC5YOR090C 1719 nt2.95□□□□□ -1.94
CDC9P04819 RCY1YJL204C 2523 nt2.95□□□□□ -1.94
CDC9P04819 PRP6YBR055C 2700 nt2.95□□□□□ -1.94
CDC9P04819 YSP2YDR326C 4317 nt2.95□□□□□ -1.94
CDC9P04819 FLO1YAR050W 4614 nt2.94□□□□□ -1.94
CDC9P04819 POL2YNL262W 6669 nt2.94□□□□□ -1.94
CDC9P04819 NCL1YBL024W 2055 nt2.94□□□□□ -1.94
CDC9P04819 CIN8YEL061C 3003 nt2.94□□□□□ -1.94
CDC9P04819 SAK1YER129W 3429 nt2.94□□□□□ -1.94
CDC9P04819 REC8YPR007C 2043 nt2.94□□□□□ -1.94
CDC9P04819 YER097WYER097W 330 nt2.94□□□□□ -1.94
CDC9P04819 YMR324CYMR324C 243 nt2.94□□□□□ -1.94
CDC9P04819 YOR231C-AYOR231C-A 201 nt2.94□□□□□ -1.94
CDC9P04819 TIM18YOR297C 579 nt2.94□□□□□ -1.94
CDC9P04819 YDL025W-AYDL025W-A 105 nt2.93□□□□□ -1.94
CDC9P04819 TWF1YGR080W 999 nt2.93□□□□□ -1.94
CDC9P04819 DLS1YJL065C 504 nt2.93□□□□□ -1.94
CDC9P04819 YBL073WYBL073W 312 nt2.93□□□□□ -1.94
CDC9P04819 PGA1YNL158W 597 nt2.93□□□□□ -1.94
CDC9P04819 CSR2YPR030W 3366 nt2.93□□□□□ -1.94
CDC9P04819 UBP11YKR098C 2154 nt2.93□□□□□ -1.94
CDC9P04819 SDC1YDR469W 528 nt2.92□□□□□ -1.94
CDC9P04819 LSO2YGR169C-A 279 nt2.92□□□□□ -1.94
CDC9P04819 RPL39YJL189W 156 nt2.92□□□□□ -1.94
CDC9P04819 SDC25YLL016W 3147 nt2.92□□□□□ -1.94
CDC9P04819 SPO71YDR104C 3738 nt2.92□□□□□ -1.94
CDC9P04819 IPT1YDR072C 1584 nt2.91□□□□□ -1.94
CDC9P04819 RLI1YDR091C 1827 nt2.91□□□□□ -1.94
CDC9P04819 CDC20YGL116W 1833 nt2.91□□□□□ -1.94
CDC9P04819 BMH2YDR099W 822 nt2.91□□□□□ -1.94
CDC9P04819 MPH1YIR002C 2982 nt2.91□□□□□ -1.94
CDC9P04819 KAR3YPR141C 2190 nt2.91□□□□□ -1.94
CDC9P04819 YJL070CYJL070C 2667 nt2.9□□□□□ -1.94
CDC9P04819 RIF1YBR275C 5751 nt2.9□□□□□ -1.95
CDC9P04819 snR65snR65 100 nt2.9□□□□□ -1.95
CDC9P04819 YGR174W-AYGR174W-A 87 nt2.9□□□□□ -1.95
CDC9P04819 YKL083WYKL083W 615 nt2.9□□□□□ -1.95
CDC9P04819 ISF1YMR081C 1017 nt2.9□□□□□ -1.95
CDC9P04819 LSM7YNL147W 348 nt2.9□□□□□ -1.95
CDC9P04819 RPA190YOR341W 4995 nt2.89□□□□□ -1.95
CDC9P04819 FMP16YDR070C 282 nt2.89□□□□□ -1.95
CDC9P04819 DAD4YDR320C-A 219 nt2.89□□□□□ -1.95
CDC9P04819 AIM9YER080W 1884 nt2.89□□□□□ -1.95
CDC9P04819 YGL024WYGL024W 336 nt2.89□□□□□ -1.95
CDC9P04819 YGL239CYGL239C 315 nt2.89□□□□□ -1.95
CDC9P04819 tW(UCA)QtW(UCA)Q 74 nt2.89□□□□□ -1.95
CDC9P04819 YKR033CYKR033C 426 nt2.89□□□□□ -1.95
CDC9P04819 RPL26AYLR344W 384 nt2.89□□□□□ -1.95
Retrieved 100 of 7,029 protein–RNA pairs in 61.5 ms