Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 AL049796.1-201ENST00000565336 1766 ntBASIC20■□□□□ 0.79
TNFP01375 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TNFP01375 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20■□□□□ 0.79
TNFP01375 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TNFP01375 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
TNFP01375 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TNFP01375 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.99■□□□□ 0.79
TNFP01375 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TNFP01375 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
TNFP01375 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TNFP01375 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TNFP01375 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.99■□□□□ 0.79
TNFP01375 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TNFP01375 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.99■□□□□ 0.79
TNFP01375 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.99■□□□□ 0.79
TNFP01375 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.99■□□□□ 0.79
TNFP01375 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
TNFP01375 AP006294.2-201ENST00000641667 209 ntBASIC19.99■□□□□ 0.79
TNFP01375 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TNFP01375 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TNFP01375 AC121338.2-201ENST00000622535 1744 ntBASIC19.99■□□□□ 0.79
TNFP01375 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TNFP01375 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
TNFP01375 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TNFP01375 AC027702.1-201ENST00000563810 1770 ntBASIC19.98■□□□□ 0.79
TNFP01375 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
TNFP01375 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TNFP01375 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TNFP01375 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TNFP01375 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TNFP01375 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TNFP01375 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.98■□□□□ 0.79
TNFP01375 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.98■□□□□ 0.79
TNFP01375 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TNFP01375 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TNFP01375 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.98■□□□□ 0.79
TNFP01375 AL024507.2-201ENST00000606070 2574 ntBASIC19.98■□□□□ 0.79
TNFP01375 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.98■□□□□ 0.79
TNFP01375 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TNFP01375 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.98■□□□□ 0.79
TNFP01375 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
TNFP01375 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TNFP01375 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TNFP01375 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TNFP01375 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
TNFP01375 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TNFP01375 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
TNFP01375 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TNFP01375 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.97■□□□□ 0.79
TNFP01375 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TNFP01375 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TNFP01375 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TNFP01375 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.97■□□□□ 0.79
TNFP01375 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.97■□□□□ 0.79
TNFP01375 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.97■□□□□ 0.79
TNFP01375 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TNFP01375 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.97■□□□□ 0.79
TNFP01375 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TNFP01375 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TNFP01375 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TNFP01375 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
TNFP01375 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.97■□□□□ 0.79
TNFP01375 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
TNFP01375 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TNFP01375 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.97■□□□□ 0.79
TNFP01375 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TNFP01375 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.96■□□□□ 0.79
TNFP01375 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TNFP01375 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
TNFP01375 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TNFP01375 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TNFP01375 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
TNFP01375 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.96■□□□□ 0.79
TNFP01375 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.96■□□□□ 0.79
TNFP01375 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.96■□□□□ 0.79
TNFP01375 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.96■□□□□ 0.79
TNFP01375 AC093827.2-201ENST00000512654 315 ntBASIC19.96■□□□□ 0.79
TNFP01375 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.96■□□□□ 0.79
TNFP01375 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TNFP01375 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.96■□□□□ 0.79
TNFP01375 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TNFP01375 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.96■□□□□ 0.79
TNFP01375 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TNFP01375 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
TNFP01375 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TNFP01375 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
TNFP01375 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TNFP01375 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.95■□□□□ 0.78
TNFP01375 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TNFP01375 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.95■□□□□ 0.78
TNFP01375 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TNFP01375 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.95■□□□□ 0.78
TNFP01375 AL390719.1-204ENST00000412397 1219 ntBASIC19.95■□□□□ 0.78
TNFP01375 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
TNFP01375 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
TNFP01375 MIR2861-201ENST00000636310 90 ntBASIC19.95■□□□□ 0.78
TNFP01375 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TNFP01375 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TNFP01375 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TNFP01375 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms