Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLPXO76031 AC005332.7-201ENST00000614046 2005 ntBASIC18.49■□□□□ 0.55
CLPXO76031 AC121338.2-201ENST00000622535 1744 ntBASIC18.49■□□□□ 0.55
CLPXO76031 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.49■□□□□ 0.55
CLPXO76031 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.49■□□□□ 0.55
CLPXO76031 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
CLPXO76031 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CLPXO76031 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLPXO76031 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLPXO76031 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CLPXO76031 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLPXO76031 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CLPXO76031 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CLPXO76031 AC079089.2-201ENST00000531211 1277 ntBASIC18.48■□□□□ 0.55
CLPXO76031 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CLPXO76031 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CLPXO76031 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CLPXO76031 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.48■□□□□ 0.55
CLPXO76031 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.48■□□□□ 0.55
CLPXO76031 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CLPXO76031 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLPXO76031 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLPXO76031 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.47■□□□□ 0.55
CLPXO76031 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLPXO76031 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.47■□□□□ 0.55
CLPXO76031 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLPXO76031 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.47■□□□□ 0.55
CLPXO76031 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLPXO76031 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
CLPXO76031 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLPXO76031 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLPXO76031 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLPXO76031 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLPXO76031 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLPXO76031 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC18.47■□□□□ 0.55
CLPXO76031 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC18.47■□□□□ 0.55
CLPXO76031 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
CLPXO76031 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLPXO76031 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
CLPXO76031 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLPXO76031 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLPXO76031 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.46■□□□□ 0.55
CLPXO76031 AC009102.2-201ENST00000606772 1639 ntBASIC18.46■□□□□ 0.55
CLPXO76031 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
CLPXO76031 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLPXO76031 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLPXO76031 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
CLPXO76031 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC18.46■□□□□ 0.55
CLPXO76031 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLPXO76031 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLPXO76031 AC110285.6-201ENST00000617652 491 ntBASIC18.46■□□□□ 0.55
CLPXO76031 AP004607.7-201ENST00000527152 1677 ntBASIC18.46■□□□□ 0.55
CLPXO76031 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLPXO76031 OR7E47P-201ENST00000546390 1422 ntBASIC18.46■□□□□ 0.55
CLPXO76031 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLPXO76031 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLPXO76031 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.46■□□□□ 0.55
CLPXO76031 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLPXO76031 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLPXO76031 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC18.45■□□□□ 0.54
CLPXO76031 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CLPXO76031 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.45■□□□□ 0.54
CLPXO76031 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLPXO76031 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLPXO76031 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLPXO76031 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLPXO76031 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
CLPXO76031 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLPXO76031 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLPXO76031 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC18.45■□□□□ 0.54
CLPXO76031 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CLPXO76031 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC18.45■□□□□ 0.54
CLPXO76031 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.45■□□□□ 0.54
CLPXO76031 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLPXO76031 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CLPXO76031 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.45■□□□□ 0.54
CLPXO76031 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CLPXO76031 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.44■□□□□ 0.54
CLPXO76031 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLPXO76031 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLPXO76031 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
CLPXO76031 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CLPXO76031 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLPXO76031 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLPXO76031 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.44■□□□□ 0.54
CLPXO76031 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLPXO76031 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLPXO76031 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.44■□□□□ 0.54
CLPXO76031 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CLPXO76031 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLPXO76031 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.44■□□□□ 0.54
CLPXO76031 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLPXO76031 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CLPXO76031 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLPXO76031 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
CLPXO76031 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLPXO76031 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLPXO76031 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLPXO76031 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLPXO76031 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms