Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRAMEF4O60810 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRAMEF4O60810 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.68■□□□□ 0.74
PRAMEF4O60810 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.68■□□□□ 0.74
PRAMEF4O60810 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PRAMEF4O60810 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRAMEF4O60810 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.68■□□□□ 0.74
PRAMEF4O60810 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRAMEF4O60810 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRAMEF4O60810 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRAMEF4O60810 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRAMEF4O60810 AC004911.1-201ENST00000416316 871 ntBASIC19.68■□□□□ 0.74
PRAMEF4O60810 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.68■□□□□ 0.74
PRAMEF4O60810 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.68■□□□□ 0.74
PRAMEF4O60810 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.68■□□□□ 0.74
PRAMEF4O60810 BID-214ENST00000617586 542 ntTSL 5 BASIC19.68■□□□□ 0.74
PRAMEF4O60810 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRAMEF4O60810 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.68■□□□□ 0.74
PRAMEF4O60810 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRAMEF4O60810 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
PRAMEF4O60810 KRT8P36-201ENST00000489121 1440 ntBASIC19.68■□□□□ 0.74
PRAMEF4O60810 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PRAMEF4O60810 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PRAMEF4O60810 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
PRAMEF4O60810 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PRAMEF4O60810 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PRAMEF4O60810 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.67■□□□□ 0.74
PRAMEF4O60810 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.67■□□□□ 0.74
PRAMEF4O60810 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.67■□□□□ 0.74
PRAMEF4O60810 AL162412.1-201ENST00000567129 965 ntBASIC19.67■□□□□ 0.74
PRAMEF4O60810 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.67■□□□□ 0.74
PRAMEF4O60810 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.67■□□□□ 0.74
PRAMEF4O60810 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PRAMEF4O60810 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.67■□□□□ 0.74
PRAMEF4O60810 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PRAMEF4O60810 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
PRAMEF4O60810 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
PRAMEF4O60810 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
PRAMEF4O60810 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PRAMEF4O60810 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.66■□□□□ 0.74
PRAMEF4O60810 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
PRAMEF4O60810 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.66■□□□□ 0.74
PRAMEF4O60810 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PRAMEF4O60810 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PRAMEF4O60810 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.66■□□□□ 0.74
PRAMEF4O60810 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
PRAMEF4O60810 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.66■□□□□ 0.74
PRAMEF4O60810 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PRAMEF4O60810 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.66■□□□□ 0.74
PRAMEF4O60810 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PRAMEF4O60810 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.66■□□□□ 0.74
PRAMEF4O60810 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PRAMEF4O60810 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.66■□□□□ 0.74
PRAMEF4O60810 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.66■□□□□ 0.74
PRAMEF4O60810 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PRAMEF4O60810 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PRAMEF4O60810 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PRAMEF4O60810 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PRAMEF4O60810 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PRAMEF4O60810 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PRAMEF4O60810 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PRAMEF4O60810 AC092720.2-201ENST00000602388 1665 ntBASIC19.65■□□□□ 0.74
PRAMEF4O60810 SLC25A24-204ENST00000569674 2357 ntBASIC19.65■□□□□ 0.74
PRAMEF4O60810 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PRAMEF4O60810 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
PRAMEF4O60810 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
PRAMEF4O60810 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.65■□□□□ 0.74
PRAMEF4O60810 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
PRAMEF4O60810 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PRAMEF4O60810 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PRAMEF4O60810 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PRAMEF4O60810 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
PRAMEF4O60810 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.65■□□□□ 0.74
PRAMEF4O60810 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.65■□□□□ 0.74
PRAMEF4O60810 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PRAMEF4O60810 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.65■□□□□ 0.74
PRAMEF4O60810 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PRAMEF4O60810 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
PRAMEF4O60810 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.65■□□□□ 0.74
PRAMEF4O60810 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.65■□□□□ 0.74
PRAMEF4O60810 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
PRAMEF4O60810 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.65■□□□□ 0.74
PRAMEF4O60810 CYP21A1P-202ENST00000354927 1481 ntBASIC19.65■□□□□ 0.74
PRAMEF4O60810 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PRAMEF4O60810 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.65■□□□□ 0.74
PRAMEF4O60810 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
PRAMEF4O60810 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.65■□□□□ 0.74
PRAMEF4O60810 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PRAMEF4O60810 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
PRAMEF4O60810 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PRAMEF4O60810 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PRAMEF4O60810 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
PRAMEF4O60810 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
PRAMEF4O60810 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PRAMEF4O60810 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
PRAMEF4O60810 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.64■□□□□ 0.73
PRAMEF4O60810 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PRAMEF4O60810 RARRES2P4-201ENST00000514074 484 ntBASIC19.64■□□□□ 0.73
PRAMEF4O60810 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.64■□□□□ 0.73
PRAMEF4O60810 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms