Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC23.97■■□□□ 1.43
CTNND1O60716 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CTNND1O60716 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC23.97■■□□□ 1.43
CTNND1O60716 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CTNND1O60716 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC23.96■■□□□ 1.43
CTNND1O60716 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC23.96■■□□□ 1.43
CTNND1O60716 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CTNND1O60716 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CTNND1O60716 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CTNND1O60716 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC23.96■■□□□ 1.43
CTNND1O60716 AC239809.2-201ENST00000415381 517 ntBASIC23.96■■□□□ 1.43
CTNND1O60716 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC23.96■■□□□ 1.43
CTNND1O60716 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC23.96■■□□□ 1.43
CTNND1O60716 REXO1L12P-201ENST00000622156 912 ntBASIC23.96■■□□□ 1.43
CTNND1O60716 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC23.96■■□□□ 1.43
CTNND1O60716 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CTNND1O60716 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC23.96■■□□□ 1.43
CTNND1O60716 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CTNND1O60716 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC23.95■■□□□ 1.42
CTNND1O60716 AC233723.2-201ENST00000623798 2106 ntBASIC23.95■■□□□ 1.42
CTNND1O60716 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
CTNND1O60716 RER1-204ENST00000378518 522 ntTSL 3 BASIC23.95■■□□□ 1.42
CTNND1O60716 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC23.95■■□□□ 1.42
CTNND1O60716 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
CTNND1O60716 TK2-204ENST00000525974 1178 ntTSL 2 BASIC23.95■■□□□ 1.42
CTNND1O60716 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.42
CTNND1O60716 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC23.95■■□□□ 1.42
CTNND1O60716 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
CTNND1O60716 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC23.95■■□□□ 1.42
CTNND1O60716 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC23.95■■□□□ 1.42
CTNND1O60716 AC110285.5-201ENST00000611501 352 ntBASIC23.95■■□□□ 1.42
CTNND1O60716 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.42
CTNND1O60716 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CTNND1O60716 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC23.95■■□□□ 1.42
CTNND1O60716 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
CTNND1O60716 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CTNND1O60716 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
CTNND1O60716 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC23.95■■□□□ 1.42
CTNND1O60716 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
CTNND1O60716 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
CTNND1O60716 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
CTNND1O60716 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CTNND1O60716 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CTNND1O60716 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CTNND1O60716 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CTNND1O60716 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
CTNND1O60716 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
CTNND1O60716 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC23.94■■□□□ 1.42
CTNND1O60716 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC23.94■■□□□ 1.42
CTNND1O60716 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
CTNND1O60716 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC23.93■■□□□ 1.42
CTNND1O60716 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
CTNND1O60716 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CTNND1O60716 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
CTNND1O60716 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CTNND1O60716 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
CTNND1O60716 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC23.93■■□□□ 1.42
CTNND1O60716 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CTNND1O60716 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CTNND1O60716 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
CTNND1O60716 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC23.93■■□□□ 1.42
CTNND1O60716 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC23.93■■□□□ 1.42
CTNND1O60716 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
CTNND1O60716 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC23.93■■□□□ 1.42
CTNND1O60716 REXO2-216ENST00000544196 452 ntTSL 3 BASIC23.93■■□□□ 1.42
CTNND1O60716 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC23.93■■□□□ 1.42
CTNND1O60716 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC23.93■■□□□ 1.42
CTNND1O60716 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
CTNND1O60716 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CTNND1O60716 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CTNND1O60716 CLDN5-201ENST00000403084 2357 ntBASIC23.93■■□□□ 1.42
CTNND1O60716 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC23.93■■□□□ 1.42
CTNND1O60716 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
CTNND1O60716 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
CTNND1O60716 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CTNND1O60716 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CTNND1O60716 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CTNND1O60716 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CTNND1O60716 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
CTNND1O60716 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC23.92■■□□□ 1.42
CTNND1O60716 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CTNND1O60716 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
CTNND1O60716 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC23.92■■□□□ 1.42
CTNND1O60716 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CTNND1O60716 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CTNND1O60716 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
CTNND1O60716 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
CTNND1O60716 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC23.92■■□□□ 1.42
CTNND1O60716 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
CTNND1O60716 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
CTNND1O60716 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CTNND1O60716 ECEL1P3-201ENST00000427961 737 ntBASIC23.92■■□□□ 1.42
CTNND1O60716 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CTNND1O60716 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC23.92■■□□□ 1.42
CTNND1O60716 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
CTNND1O60716 AP001412.1-201ENST00000608405 714 ntBASIC23.92■■□□□ 1.42
CTNND1O60716 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC23.92■■□□□ 1.42
CTNND1O60716 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CTNND1O60716 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC23.92■■□□□ 1.42
CTNND1O60716 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC23.92■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms