Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.55■□□□□ 0.56
RNF13O43567 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.55■□□□□ 0.56
RNF13O43567 RARRES2P11-201ENST00000635158 484 ntBASIC18.55■□□□□ 0.56
RNF13O43567 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
RNF13O43567 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF13O43567 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF13O43567 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.55■□□□□ 0.56
RNF13O43567 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RNF13O43567 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.55■□□□□ 0.56
RNF13O43567 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF13O43567 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF13O43567 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
RNF13O43567 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF13O43567 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RNF13O43567 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF13O43567 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
RNF13O43567 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.54■□□□□ 0.56
RNF13O43567 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF13O43567 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.54■□□□□ 0.56
RNF13O43567 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF13O43567 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.54■□□□□ 0.56
RNF13O43567 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.54■□□□□ 0.56
RNF13O43567 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF13O43567 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF13O43567 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
RNF13O43567 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.54■□□□□ 0.56
RNF13O43567 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF13O43567 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.54■□□□□ 0.56
RNF13O43567 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
RNF13O43567 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF13O43567 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
RNF13O43567 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF13O43567 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF13O43567 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF13O43567 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.53■□□□□ 0.56
RNF13O43567 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF13O43567 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RNF13O43567 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RNF13O43567 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
RNF13O43567 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF13O43567 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF13O43567 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RNF13O43567 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RNF13O43567 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RNF13O43567 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.53■□□□□ 0.56
RNF13O43567 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RNF13O43567 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.53■□□□□ 0.56
RNF13O43567 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF13O43567 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.53■□□□□ 0.56
RNF13O43567 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF13O43567 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.53■□□□□ 0.56
RNF13O43567 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF13O43567 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF13O43567 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.52■□□□□ 0.56
RNF13O43567 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF13O43567 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.52■□□□□ 0.56
RNF13O43567 AFG3L1P-217ENST00000557444 2447 ntBASIC18.52■□□□□ 0.56
RNF13O43567 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
RNF13O43567 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
RNF13O43567 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF13O43567 AC097381.1-201ENST00000429019 1296 ntBASIC18.52■□□□□ 0.56
RNF13O43567 AC034268.1-201ENST00000441047 882 ntBASIC18.52■□□□□ 0.56
RNF13O43567 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.52■□□□□ 0.56
RNF13O43567 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
RNF13O43567 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.52■□□□□ 0.56
RNF13O43567 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
RNF13O43567 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.52■□□□□ 0.56
RNF13O43567 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.52■□□□□ 0.56
RNF13O43567 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF13O43567 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
RNF13O43567 FP700111.2-201ENST00000619190 1892 ntBASIC18.52■□□□□ 0.55
RNF13O43567 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RNF13O43567 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
RNF13O43567 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RNF13O43567 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
RNF13O43567 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF13O43567 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF13O43567 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RNF13O43567 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF13O43567 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RNF13O43567 AC007225.1-201ENST00000566331 1836 ntBASIC18.51■□□□□ 0.55
RNF13O43567 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
RNF13O43567 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
RNF13O43567 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
RNF13O43567 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.51■□□□□ 0.55
RNF13O43567 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RNF13O43567 PCDHAC2-203ENST00000615316 3011 ntBASIC18.51■□□□□ 0.55
RNF13O43567 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF13O43567 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
RNF13O43567 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RNF13O43567 AC027702.1-201ENST00000563810 1770 ntBASIC18.51■□□□□ 0.55
RNF13O43567 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF13O43567 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF13O43567 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
RNF13O43567 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.51■□□□□ 0.55
RNF13O43567 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RNF13O43567 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.51■□□□□ 0.55
RNF13O43567 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF13O43567 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.51■□□□□ 0.55
RNF13O43567 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms