Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC22.57■■□□□ 1.2
TNRC18O15417 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC22.57■■□□□ 1.2
TNRC18O15417 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TNRC18O15417 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
TNRC18O15417 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC22.57■■□□□ 1.2
TNRC18O15417 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TNRC18O15417 SAPCD2P1-201ENST00000395413 1184 ntBASIC22.57■■□□□ 1.2
TNRC18O15417 AC092647.4-201ENST00000457211 535 ntBASIC22.57■■□□□ 1.2
TNRC18O15417 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC22.57■■□□□ 1.2
TNRC18O15417 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC22.57■■□□□ 1.2
TNRC18O15417 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TNRC18O15417 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TNRC18O15417 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC22.56■■□□□ 1.2
TNRC18O15417 PTK2-216ENST00000519881 863 ntTSL 3 BASIC22.56■■□□□ 1.2
TNRC18O15417 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC22.56■■□□□ 1.2
TNRC18O15417 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
TNRC18O15417 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TNRC18O15417 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
TNRC18O15417 CFL1-212ENST00000531413 636 ntTSL 3 BASIC22.56■■□□□ 1.2
TNRC18O15417 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
TNRC18O15417 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
TNRC18O15417 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
TNRC18O15417 NBPF21P-201ENST00000425093 1451 ntBASIC22.56■■□□□ 1.2
TNRC18O15417 TREX2-204ENST00000370212 861 ntTSL 5 BASIC22.56■■□□□ 1.2
TNRC18O15417 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
TNRC18O15417 PGM5P4-201ENST00000421970 445 ntBASIC22.56■■□□□ 1.2
TNRC18O15417 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
TNRC18O15417 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TNRC18O15417 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TNRC18O15417 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC22.55■■□□□ 1.2
TNRC18O15417 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC22.55■■□□□ 1.2
TNRC18O15417 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC22.55■■□□□ 1.2
TNRC18O15417 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC22.55■■□□□ 1.2
TNRC18O15417 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TNRC18O15417 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TNRC18O15417 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
TNRC18O15417 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC22.54■■□□□ 1.2
TNRC18O15417 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC22.54■■□□□ 1.2
TNRC18O15417 EGLN1P1-201ENST00000531623 762 ntBASIC22.54■■□□□ 1.2
TNRC18O15417 PRR29-207ENST00000580752 458 ntTSL 3 BASIC22.54■■□□□ 1.2
TNRC18O15417 HOTTIP_1.1-201ENST00000620415 57 ntBASIC22.54■■□□□ 1.2
TNRC18O15417 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC22.54■■□□□ 1.2
TNRC18O15417 AC124283.5-201ENST00000624661 1809 ntBASIC22.54■■□□□ 1.2
TNRC18O15417 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
TNRC18O15417 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TNRC18O15417 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC22.54■■□□□ 1.2
TNRC18O15417 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
TNRC18O15417 CYP21A1P-202ENST00000354927 1481 ntBASIC22.54■■□□□ 1.2
TNRC18O15417 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC22.54■■□□□ 1.2
TNRC18O15417 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
TNRC18O15417 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TNRC18O15417 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC22.53■■□□□ 1.2
TNRC18O15417 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC22.53■■□□□ 1.2
TNRC18O15417 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC22.53■■□□□ 1.2
TNRC18O15417 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TNRC18O15417 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
TNRC18O15417 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
TNRC18O15417 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC22.53■■□□□ 1.2
TNRC18O15417 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
TNRC18O15417 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TNRC18O15417 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TNRC18O15417 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
TNRC18O15417 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC22.53■■□□□ 1.2
TNRC18O15417 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
TNRC18O15417 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC22.53■■□□□ 1.2
TNRC18O15417 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC22.53■■□□□ 1.2
TNRC18O15417 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC22.53■■□□□ 1.2
TNRC18O15417 AC004264.1-201ENST00000608354 794 ntBASIC22.53■■□□□ 1.2
TNRC18O15417 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
TNRC18O15417 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TNRC18O15417 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC22.52■■□□□ 1.2
TNRC18O15417 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC22.52■■□□□ 1.2
TNRC18O15417 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TNRC18O15417 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
TNRC18O15417 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
TNRC18O15417 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC22.52■■□□□ 1.2
TNRC18O15417 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TNRC18O15417 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
TNRC18O15417 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC22.52■■□□□ 1.2
TNRC18O15417 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC22.52■■□□□ 1.2
TNRC18O15417 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC22.52■■□□□ 1.2
TNRC18O15417 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TNRC18O15417 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC22.52■■□□□ 1.2
TNRC18O15417 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
TNRC18O15417 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TNRC18O15417 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TNRC18O15417 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TNRC18O15417 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC22.51■■□□□ 1.19
TNRC18O15417 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TNRC18O15417 AC111152.3-201ENST00000569699 673 ntBASIC22.51■■□□□ 1.19
TNRC18O15417 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC22.51■■□□□ 1.19
TNRC18O15417 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC22.51■■□□□ 1.19
TNRC18O15417 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC22.51■■□□□ 1.19
TNRC18O15417 MESTP1-201ENST00000404287 994 ntBASIC22.51■■□□□ 1.19
TNRC18O15417 AC007322.3-201ENST00000426526 701 ntBASIC22.51■■□□□ 1.19
TNRC18O15417 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC22.51■■□□□ 1.19
TNRC18O15417 AP005242.2-201ENST00000580065 1175 ntBASIC22.51■■□□□ 1.19
TNRC18O15417 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
TNRC18O15417 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TNRC18O15417 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC22.51■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms