Protein–RNA interactions for Protein: O15255

RTL8C, CAAX box protein 1, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8CO15255 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RTL8CO15255 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RTL8CO15255 STX5-203ENST00000394690 1568 ntTSL 5 BASIC13.64□□□□□ -0.23
RTL8CO15255 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RTL8CO15255 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
RTL8CO15255 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
RTL8CO15255 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
RTL8CO15255 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC13.64□□□□□ -0.23
RTL8CO15255 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC13.64□□□□□ -0.23
RTL8CO15255 SERP1-205ENST00000487153 657 ntTSL 4 BASIC13.64□□□□□ -0.23
RTL8CO15255 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
RTL8CO15255 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RTL8CO15255 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC13.64□□□□□ -0.23
RTL8CO15255 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC13.64□□□□□ -0.23
RTL8CO15255 RARRES2P10-201ENST00000564312 460 ntBASIC13.64□□□□□ -0.23
RTL8CO15255 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC13.64□□□□□ -0.23
RTL8CO15255 AC005829.2-201ENST00000571422 1056 ntBASIC13.64□□□□□ -0.23
RTL8CO15255 AL445228.2-201ENST00000605589 952 ntBASIC13.64□□□□□ -0.23
RTL8CO15255 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
RTL8CO15255 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC13.64□□□□□ -0.23
RTL8CO15255 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RTL8CO15255 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RTL8CO15255 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC13.64□□□□□ -0.23
RTL8CO15255 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC13.64□□□□□ -0.23
RTL8CO15255 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RTL8CO15255 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC13.64□□□□□ -0.23
RTL8CO15255 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
RTL8CO15255 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RTL8CO15255 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RTL8CO15255 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RTL8CO15255 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC13.63□□□□□ -0.23
RTL8CO15255 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC13.63□□□□□ -0.23
RTL8CO15255 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RTL8CO15255 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RTL8CO15255 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RTL8CO15255 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC13.63□□□□□ -0.23
RTL8CO15255 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
RTL8CO15255 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC13.63□□□□□ -0.23
RTL8CO15255 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC13.63□□□□□ -0.23
RTL8CO15255 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC13.63□□□□□ -0.23
RTL8CO15255 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RTL8CO15255 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC13.63□□□□□ -0.23
RTL8CO15255 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC13.63□□□□□ -0.23
RTL8CO15255 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RTL8CO15255 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC13.63□□□□□ -0.23
RTL8CO15255 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
RTL8CO15255 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RTL8CO15255 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC13.63□□□□□ -0.23
RTL8CO15255 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RTL8CO15255 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC13.63□□□□□ -0.23
RTL8CO15255 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
RTL8CO15255 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC13.63□□□□□ -0.23
RTL8CO15255 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RTL8CO15255 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RTL8CO15255 AC116050.2-201ENST00000612102 1779 ntBASIC13.63□□□□□ -0.23
RTL8CO15255 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
RTL8CO15255 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC13.63□□□□□ -0.23
RTL8CO15255 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
RTL8CO15255 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
RTL8CO15255 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RTL8CO15255 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
RTL8CO15255 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC13.62□□□□□ -0.23
RTL8CO15255 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RTL8CO15255 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RTL8CO15255 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RTL8CO15255 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC13.62□□□□□ -0.23
RTL8CO15255 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RTL8CO15255 FAM99A-202ENST00000538190 1989 ntBASIC13.62□□□□□ -0.23
RTL8CO15255 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RTL8CO15255 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RTL8CO15255 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RTL8CO15255 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
RTL8CO15255 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
RTL8CO15255 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RTL8CO15255 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
RTL8CO15255 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RTL8CO15255 TMPOP1-202ENST00000424642 1267 ntBASIC13.62□□□□□ -0.23
RTL8CO15255 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC13.62□□□□□ -0.23
RTL8CO15255 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
RTL8CO15255 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RTL8CO15255 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC13.62□□□□□ -0.23
RTL8CO15255 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC13.62□□□□□ -0.23
RTL8CO15255 CABP2-204ENST00000636477 941 ntTSL 5 BASIC13.62□□□□□ -0.23
RTL8CO15255 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RTL8CO15255 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RTL8CO15255 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RTL8CO15255 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
RTL8CO15255 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC13.62□□□□□ -0.23
RTL8CO15255 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
RTL8CO15255 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RTL8CO15255 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC13.62□□□□□ -0.23
RTL8CO15255 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RTL8CO15255 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RTL8CO15255 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RTL8CO15255 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
RTL8CO15255 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC13.62□□□□□ -0.23
RTL8CO15255 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RTL8CO15255 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC13.61□□□□□ -0.23
RTL8CO15255 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RTL8CO15255 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms