Protein–RNA interactions for Protein: O13527

TY1B-A, Truncated transposon Ty1-A Gag-Pol polyprotein, yeastyeast

Known RBP Predictions only

Length 1,196 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-AO13527 YPR145C-AYPR145C-A 237 nt2.35□□□□□ -2.03
TY1B-AO13527 YHR214C-BYHR214C-B 5382 nt2.34□□□□□ -2.03
TY1B-AO13527 PEX8YGR077C 1770 nt2.34□□□□□ -2.03
TY1B-AO13527 MGM1YOR211C 2646 nt2.34□□□□□ -2.03
TY1B-AO13527 MET32YDR253C 576 nt2.34□□□□□ -2.03
TY1B-AO13527 GPI8YDR331W 1236 nt2.34□□□□□ -2.03
TY1B-AO13527 ILM1YJR118C 612 nt2.34□□□□□ -2.03
TY1B-AO13527 RCN2YOR220W 798 nt2.34□□□□□ -2.03
TY1B-AO13527 TRM7YBR061C 933 nt2.34□□□□□ -2.03
TY1B-AO13527 YPR172WYPR172W 603 nt2.34□□□□□ -2.03
TY1B-AO13527 FIG2YCR089W 4830 nt2.34□□□□□ -2.04
TY1B-AO13527 HNT1YDL125C 477 nt2.33□□□□□ -2.04
TY1B-AO13527 YER038W-AYER038W-A 381 nt2.33□□□□□ -2.04
TY1B-AO13527 GIC1YHR061C 945 nt2.33□□□□□ -2.04
TY1B-AO13527 YHC1YLR298C 696 nt2.33□□□□□ -2.04
TY1B-AO13527 LOA1YPR139C 903 nt2.33□□□□□ -2.04
TY1B-AO13527 TOR1YJR066W 7413 nt2.32□□□□□ -2.04
TY1B-AO13527 YCR108CYCR108C 192 nt2.32□□□□□ -2.04
TY1B-AO13527 IST3YIR005W 447 nt2.32□□□□□ -2.04
TY1B-AO13527 APQ13YJL075C 417 nt2.32□□□□□ -2.04
TY1B-AO13527 YJR023CYJR023C 402 nt2.32□□□□□ -2.04
TY1B-AO13527 VTI1YMR197C 654 nt2.32□□□□□ -2.04
TY1B-AO13527 BRE1YDL074C 2103 nt2.32□□□□□ -2.04
TY1B-AO13527 UFD4YKL010C 4452 nt2.31□□□□□ -2.04
TY1B-AO13527 PES4YFR023W 1836 nt2.31□□□□□ -2.04
TY1B-AO13527 YER172C-AYER172C-A 381 nt2.31□□□□□ -2.04
TY1B-AO13527 YIL058WYIL058W 285 nt2.31□□□□□ -2.04
TY1B-AO13527 RMP1YLR145W 606 nt2.31□□□□□ -2.04
TY1B-AO13527 PHO80YOL001W 882 nt2.31□□□□□ -2.04
TY1B-AO13527 KIP1YBL063W 3336 nt2.31□□□□□ -2.04
TY1B-AO13527 NDD1YOR372C 1665 nt2.31□□□□□ -2.04
TY1B-AO13527 YOL098CYOL098C 3114 nt2.31□□□□□ -2.04
TY1B-AO13527 CRD1YDL142C 852 nt2.3□□□□□ -2.04
TY1B-AO13527 RTR2YDR066C 591 nt2.3□□□□□ -2.04
TY1B-AO13527 DAD4YDR320C-A 219 nt2.3□□□□□ -2.04
TY1B-AO13527 YKR051WYKR051W 1257 nt2.3□□□□□ -2.04
TY1B-AO13527 CMS1YLR003C 876 nt2.3□□□□□ -2.04
TY1B-AO13527 UBX4YMR067C 1251 nt2.3□□□□□ -2.04
TY1B-AO13527 YNL146C-AYNL146C-A 195 nt2.3□□□□□ -2.04
TY1B-AO13527 VPH1YOR270C 2523 nt2.3□□□□□ -2.04
TY1B-AO13527 YFR016CYFR016C 3702 nt2.29□□□□□ -2.04
TY1B-AO13527 ATG9YDL149W 2994 nt2.29□□□□□ -2.04
TY1B-AO13527 IPT1YDR072C 1584 nt2.29□□□□□ -2.04
TY1B-AO13527 CIC1YHR052W 1131 nt2.29□□□□□ -2.04
TY1B-AO13527 YHR071C-AYHR071C-A 321 nt2.29□□□□□ -2.04
TY1B-AO13527 TPM2YIL138C 486 nt2.29□□□□□ -2.04
TY1B-AO13527 SPC1YJR010C-A 285 nt2.29□□□□□ -2.04
TY1B-AO13527 SWM2YNR004W 441 nt2.29□□□□□ -2.04
TY1B-AO13527 TOA1YOR194C 861 nt2.29□□□□□ -2.04
TY1B-AO13527 UBR1YGR184C 5853 nt2.29□□□□□ -2.04
TY1B-AO13527 YJL070CYJL070C 2667 nt2.28□□□□□ -2.04
TY1B-AO13527 TIM10YHR005C-A 282 nt2.28□□□□□ -2.04
TY1B-AO13527 HYR1YIR037W 492 nt2.28□□□□□ -2.04
TY1B-AO13527 EAF6YJR082C 342 nt2.28□□□□□ -2.04
TY1B-AO13527 LCL2YLR104W 396 nt2.28□□□□□ -2.04
TY1B-AO13527 YOL159C-AYOL159C-A 273 nt2.28□□□□□ -2.04
TY1B-AO13527 ASG1YIL130W 2895 nt2.28□□□□□ -2.04
TY1B-AO13527 MMS22YLR320W 4365 nt2.28□□□□□ -2.04
TY1B-AO13527 RTT107YHR154W 3213 nt2.28□□□□□ -2.04
TY1B-AO13527 DPB11YJL090C 2295 nt2.28□□□□□ -2.05
TY1B-AO13527 MGA2YIR033W 3342 nt2.27□□□□□ -2.05
TY1B-AO13527 IRC4YDR540C 540 nt2.27□□□□□ -2.05
TY1B-AO13527 PRM8YGL053W 714 nt2.27□□□□□ -2.05
TY1B-AO13527 YPS5YGL259W 498 nt2.27□□□□□ -2.05
TY1B-AO13527 RAM2YKL019W 951 nt2.27□□□□□ -2.05
TY1B-AO13527 TMA7YLR262C-A 195 nt2.27□□□□□ -2.05
TY1B-AO13527 RPB11YOL005C 363 nt2.27□□□□□ -2.05
TY1B-AO13527 YOL013W-BYOL013W-B 291 nt2.27□□□□□ -2.05
TY1B-AO13527 YPL039WYPL039W 951 nt2.27□□□□□ -2.05
TY1B-AO13527 SVS1YPL163C 783 nt2.27□□□□□ -2.05
TY1B-AO13527 TRS20YBR254C 528 nt2.27□□□□□ -2.05
TY1B-AO13527 MGR1YCL044C 1254 nt2.27□□□□□ -2.05
TY1B-AO13527 VPS8YAL002W 3825 nt2.27□□□□□ -2.05
TY1B-AO13527 GIP3YPL137C 3831 nt2.27□□□□□ -2.05
TY1B-AO13527 BUD2YKL092C 3315 nt2.26□□□□□ -2.05
TY1B-AO13527 PDR8YLR266C 2106 nt2.26□□□□□ -2.05
TY1B-AO13527 YDR199WYDR199W 366 nt2.26□□□□□ -2.05
TY1B-AO13527 MTC7YEL033W 420 nt2.26□□□□□ -2.05
TY1B-AO13527 RNR4YGR180C 1038 nt2.26□□□□□ -2.05
TY1B-AO13527 PEP8YJL053W 1140 nt2.26□□□□□ -2.05
TY1B-AO13527 RPA34YJL148W 702 nt2.26□□□□□ -2.05
TY1B-AO13527 YLR458WYLR458W 381 nt2.26□□□□□ -2.05
TY1B-AO13527 VPS20YMR077C 666 nt2.26□□□□□ -2.05
TY1B-AO13527 MDM32YOR147W 1869 nt2.26□□□□□ -2.05
TY1B-AO13527 RUD3YOR216C 1455 nt2.26□□□□□ -2.05
TY1B-AO13527 HER1YOR227W 3741 nt2.26□□□□□ -2.05
TY1B-AO13527 YFR056CYFR056C 369 nt2.25□□□□□ -2.05
TY1B-AO13527 YKL044WYKL044W 321 nt2.25□□□□□ -2.05
TY1B-AO13527 RPL37AYLR185W 267 nt2.25□□□□□ -2.05
TY1B-AO13527 UTP13YLR222C 2454 nt2.25□□□□□ -2.05
TY1B-AO13527 YGL165CYGL165C 579 nt2.24□□□□□ -2.05
TY1B-AO13527 SIP18YMR175W 240 nt2.24□□□□□ -2.05
TY1B-AO13527 YBR277CYBR277C 402 nt2.24□□□□□ -2.05
TY1B-AO13527 BRO1YPL084W 2535 nt2.24□□□□□ -2.05
TY1B-AO13527 MET18YIL128W 3099 nt2.23□□□□□ -2.05
TY1B-AO13527 LHS1YKL073W 2646 nt2.23□□□□□ -2.05
TY1B-AO13527 YAL059C-AYAL059C-A 423 nt2.23□□□□□ -2.05
TY1B-AO13527 URA10YMR271C 684 nt2.23□□□□□ -2.05
TY1B-AO13527 PRK1YIL095W 2433 nt2.23□□□□□ -2.05
TY1B-AO13527 RRP6YOR001W 2202 nt2.23□□□□□ -2.05
Retrieved 100 of 7,029 protein–RNA pairs in 18.8 ms