Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CDC7O00311 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.05■□□□□ 0.8
CDC7O00311 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.05■□□□□ 0.8
CDC7O00311 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDC7O00311 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDC7O00311 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDC7O00311 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.04■□□□□ 0.8
CDC7O00311 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDC7O00311 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CDC7O00311 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDC7O00311 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.04■□□□□ 0.8
CDC7O00311 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.04■□□□□ 0.8
CDC7O00311 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CDC7O00311 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CDC7O00311 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CDC7O00311 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDC7O00311 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDC7O00311 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.04■□□□□ 0.8
CDC7O00311 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDC7O00311 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.04■□□□□ 0.8
CDC7O00311 AC137761.2-201ENST00000561729 223 ntBASIC20.04■□□□□ 0.8
CDC7O00311 AC145350.3-201ENST00000569033 163 ntBASIC20.04■□□□□ 0.8
CDC7O00311 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.04■□□□□ 0.8
CDC7O00311 AC010536.3-201ENST00000620306 533 ntBASIC20.04■□□□□ 0.8
CDC7O00311 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDC7O00311 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.04■□□□□ 0.8
CDC7O00311 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDC7O00311 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.04■□□□□ 0.8
CDC7O00311 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDC7O00311 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDC7O00311 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDC7O00311 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.04■□□□□ 0.8
CDC7O00311 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CDC7O00311 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDC7O00311 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDC7O00311 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.03■□□□□ 0.8
CDC7O00311 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
CDC7O00311 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDC7O00311 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDC7O00311 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.03■□□□□ 0.8
CDC7O00311 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDC7O00311 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.03■□□□□ 0.8
CDC7O00311 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.03■□□□□ 0.8
CDC7O00311 TERF1P5-201ENST00000477545 1207 ntBASIC20.03■□□□□ 0.8
CDC7O00311 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CDC7O00311 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CDC7O00311 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.03■□□□□ 0.8
CDC7O00311 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CDC7O00311 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDC7O00311 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.03■□□□□ 0.8
CDC7O00311 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDC7O00311 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CDC7O00311 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDC7O00311 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDC7O00311 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CDC7O00311 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.02■□□□□ 0.8
CDC7O00311 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDC7O00311 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.8
CDC7O00311 AC112907.3-201ENST00000577781 2400 ntBASIC20.02■□□□□ 0.8
CDC7O00311 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDC7O00311 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CDC7O00311 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDC7O00311 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDC7O00311 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.02■□□□□ 0.8
CDC7O00311 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.02■□□□□ 0.8
CDC7O00311 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.02■□□□□ 0.8
CDC7O00311 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDC7O00311 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.02■□□□□ 0.8
CDC7O00311 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.02■□□□□ 0.8
CDC7O00311 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CDC7O00311 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
CDC7O00311 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.02■□□□□ 0.8
CDC7O00311 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.02■□□□□ 0.8
CDC7O00311 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDC7O00311 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CDC7O00311 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
CDC7O00311 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.79
CDC7O00311 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.02■□□□□ 0.79
CDC7O00311 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.02■□□□□ 0.79
CDC7O00311 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDC7O00311 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.01■□□□□ 0.79
CDC7O00311 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.01■□□□□ 0.79
CDC7O00311 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.01■□□□□ 0.79
CDC7O00311 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.01■□□□□ 0.79
CDC7O00311 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.01■□□□□ 0.79
CDC7O00311 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDC7O00311 CDV3P1-201ENST00000471403 739 ntBASIC20.01■□□□□ 0.79
CDC7O00311 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CDC7O00311 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDC7O00311 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDC7O00311 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CDC7O00311 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDC7O00311 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDC7O00311 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20■□□□□ 0.79
CDC7O00311 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CDC7O00311 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20■□□□□ 0.79
CDC7O00311 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20■□□□□ 0.79
CDC7O00311 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20■□□□□ 0.79
CDC7O00311 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CDC7O00311 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms