Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 AC005829.2-201ENST00000571422 1056 ntBASIC20.06■□□□□ 0.8
C4orf47A7E2U8 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
C4orf47A7E2U8 EP400NL-214ENST00000641289 2402 ntBASIC20.06■□□□□ 0.8
C4orf47A7E2U8 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
C4orf47A7E2U8 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
C4orf47A7E2U8 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
C4orf47A7E2U8 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
C4orf47A7E2U8 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
C4orf47A7E2U8 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
C4orf47A7E2U8 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
C4orf47A7E2U8 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.05■□□□□ 0.8
C4orf47A7E2U8 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
C4orf47A7E2U8 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
C4orf47A7E2U8 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.05■□□□□ 0.8
C4orf47A7E2U8 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.05■□□□□ 0.8
C4orf47A7E2U8 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.05■□□□□ 0.8
C4orf47A7E2U8 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC20.05■□□□□ 0.8
C4orf47A7E2U8 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC20.05■□□□□ 0.8
C4orf47A7E2U8 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
C4orf47A7E2U8 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.05■□□□□ 0.8
C4orf47A7E2U8 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
C4orf47A7E2U8 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
C4orf47A7E2U8 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.05■□□□□ 0.8
C4orf47A7E2U8 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
C4orf47A7E2U8 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.05■□□□□ 0.8
C4orf47A7E2U8 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
C4orf47A7E2U8 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.04■□□□□ 0.8
C4orf47A7E2U8 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.04■□□□□ 0.8
C4orf47A7E2U8 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.04■□□□□ 0.8
C4orf47A7E2U8 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.04■□□□□ 0.8
C4orf47A7E2U8 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.04■□□□□ 0.8
C4orf47A7E2U8 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.04■□□□□ 0.8
C4orf47A7E2U8 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
C4orf47A7E2U8 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.04■□□□□ 0.8
C4orf47A7E2U8 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
C4orf47A7E2U8 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
C4orf47A7E2U8 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
C4orf47A7E2U8 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
C4orf47A7E2U8 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
C4orf47A7E2U8 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
C4orf47A7E2U8 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
C4orf47A7E2U8 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
C4orf47A7E2U8 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
C4orf47A7E2U8 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
C4orf47A7E2U8 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
C4orf47A7E2U8 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
C4orf47A7E2U8 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
C4orf47A7E2U8 AC005363.2-201ENST00000618631 242 ntBASIC20.03■□□□□ 0.8
C4orf47A7E2U8 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
C4orf47A7E2U8 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
C4orf47A7E2U8 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
C4orf47A7E2U8 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
C4orf47A7E2U8 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.03■□□□□ 0.8
C4orf47A7E2U8 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
C4orf47A7E2U8 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
C4orf47A7E2U8 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.02■□□□□ 0.8
C4orf47A7E2U8 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
C4orf47A7E2U8 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.02■□□□□ 0.8
C4orf47A7E2U8 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
C4orf47A7E2U8 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
C4orf47A7E2U8 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
C4orf47A7E2U8 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
C4orf47A7E2U8 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
C4orf47A7E2U8 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
C4orf47A7E2U8 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.02■□□□□ 0.8
C4orf47A7E2U8 AL390719.1-204ENST00000412397 1219 ntBASIC20.02■□□□□ 0.8
C4orf47A7E2U8 RNF146-204ENST00000476956 884 ntTSL 2 BASIC20.02■□□□□ 0.8
C4orf47A7E2U8 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.02■□□□□ 0.8
C4orf47A7E2U8 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.02■□□□□ 0.8
C4orf47A7E2U8 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.02■□□□□ 0.8
C4orf47A7E2U8 MIR6786-201ENST00000616843 113 ntBASIC20.02■□□□□ 0.8
C4orf47A7E2U8 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
C4orf47A7E2U8 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
C4orf47A7E2U8 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
C4orf47A7E2U8 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.02■□□□□ 0.79
C4orf47A7E2U8 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
C4orf47A7E2U8 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.01■□□□□ 0.79
C4orf47A7E2U8 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.01■□□□□ 0.79
C4orf47A7E2U8 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
C4orf47A7E2U8 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.01■□□□□ 0.79
C4orf47A7E2U8 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
C4orf47A7E2U8 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
C4orf47A7E2U8 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.01■□□□□ 0.79
C4orf47A7E2U8 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.01■□□□□ 0.79
C4orf47A7E2U8 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.01■□□□□ 0.79
C4orf47A7E2U8 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.01■□□□□ 0.79
C4orf47A7E2U8 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC20.01■□□□□ 0.79
C4orf47A7E2U8 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
C4orf47A7E2U8 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.01■□□□□ 0.79
C4orf47A7E2U8 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
C4orf47A7E2U8 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
C4orf47A7E2U8 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
C4orf47A7E2U8 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
C4orf47A7E2U8 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
C4orf47A7E2U8 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
C4orf47A7E2U8 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20■□□□□ 0.79
C4orf47A7E2U8 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
C4orf47A7E2U8 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
C4orf47A7E2U8 AL117328.2-201ENST00000624617 1940 ntBASIC20■□□□□ 0.79
C4orf47A7E2U8 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms