Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TVP23AA6NH52 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.2■□□□□ 0.5
TVP23AA6NH52 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TVP23AA6NH52 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TVP23AA6NH52 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.2■□□□□ 0.5
TVP23AA6NH52 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.2■□□□□ 0.5
TVP23AA6NH52 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.2■□□□□ 0.5
TVP23AA6NH52 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.2■□□□□ 0.5
TVP23AA6NH52 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
TVP23AA6NH52 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TVP23AA6NH52 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.2■□□□□ 0.5
TVP23AA6NH52 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TVP23AA6NH52 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TVP23AA6NH52 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TVP23AA6NH52 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TVP23AA6NH52 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TVP23AA6NH52 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.2■□□□□ 0.5
TVP23AA6NH52 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.19■□□□□ 0.5
TVP23AA6NH52 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TVP23AA6NH52 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TVP23AA6NH52 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TVP23AA6NH52 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
TVP23AA6NH52 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.19■□□□□ 0.5
TVP23AA6NH52 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TVP23AA6NH52 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.19■□□□□ 0.5
TVP23AA6NH52 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TVP23AA6NH52 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.19■□□□□ 0.5
TVP23AA6NH52 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.19■□□□□ 0.5
TVP23AA6NH52 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
TVP23AA6NH52 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.19■□□□□ 0.5
TVP23AA6NH52 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TVP23AA6NH52 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.19■□□□□ 0.5
TVP23AA6NH52 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TVP23AA6NH52 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TVP23AA6NH52 AC092720.2-201ENST00000602388 1665 ntBASIC18.18■□□□□ 0.5
TVP23AA6NH52 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TVP23AA6NH52 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.18■□□□□ 0.5
TVP23AA6NH52 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.18■□□□□ 0.5
TVP23AA6NH52 AL162377.1-201ENST00000618844 1793 ntBASIC18.18■□□□□ 0.5
TVP23AA6NH52 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.18■□□□□ 0.5
TVP23AA6NH52 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.18■□□□□ 0.5
TVP23AA6NH52 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.18■□□□□ 0.5
TVP23AA6NH52 AC123595.1-201ENST00000440769 1046 ntBASIC18.18■□□□□ 0.5
TVP23AA6NH52 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.18■□□□□ 0.5
TVP23AA6NH52 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TVP23AA6NH52 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.18■□□□□ 0.5
TVP23AA6NH52 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.18■□□□□ 0.5
TVP23AA6NH52 TERF1P2-201ENST00000583350 1212 ntBASIC18.18■□□□□ 0.5
TVP23AA6NH52 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.18■□□□□ 0.5
TVP23AA6NH52 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TVP23AA6NH52 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TVP23AA6NH52 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TVP23AA6NH52 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.18■□□□□ 0.5
TVP23AA6NH52 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TVP23AA6NH52 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TVP23AA6NH52 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TVP23AA6NH52 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.17■□□□□ 0.5
TVP23AA6NH52 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TVP23AA6NH52 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.17■□□□□ 0.5
TVP23AA6NH52 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.17■□□□□ 0.5
TVP23AA6NH52 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TVP23AA6NH52 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.17■□□□□ 0.5
TVP23AA6NH52 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TVP23AA6NH52 YBX1P1-201ENST00000445822 960 ntBASIC18.17■□□□□ 0.5
TVP23AA6NH52 CCDC92B-201ENST00000575506 885 ntBASIC18.17■□□□□ 0.5
TVP23AA6NH52 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.17■□□□□ 0.5
TVP23AA6NH52 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TVP23AA6NH52 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.17■□□□□ 0.5
TVP23AA6NH52 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TVP23AA6NH52 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TVP23AA6NH52 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.16■□□□□ 0.5
TVP23AA6NH52 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.16■□□□□ 0.5
TVP23AA6NH52 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
TVP23AA6NH52 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.16■□□□□ 0.5
TVP23AA6NH52 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TVP23AA6NH52 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TVP23AA6NH52 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.16■□□□□ 0.5
TVP23AA6NH52 AC099778.1-201ENST00000568593 1911 ntBASIC18.16■□□□□ 0.5
TVP23AA6NH52 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TVP23AA6NH52 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TVP23AA6NH52 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
TVP23AA6NH52 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TVP23AA6NH52 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.16■□□□□ 0.5
TVP23AA6NH52 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.16■□□□□ 0.5
TVP23AA6NH52 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.16■□□□□ 0.5
TVP23AA6NH52 KRT18P14-201ENST00000534205 1250 ntBASIC18.16■□□□□ 0.5
TVP23AA6NH52 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.16■□□□□ 0.5
TVP23AA6NH52 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.16■□□□□ 0.5
TVP23AA6NH52 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TVP23AA6NH52 AC116050.2-201ENST00000612102 1779 ntBASIC18.16■□□□□ 0.5
TVP23AA6NH52 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TVP23AA6NH52 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TVP23AA6NH52 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TVP23AA6NH52 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TVP23AA6NH52 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
TVP23AA6NH52 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
TVP23AA6NH52 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.15■□□□□ 0.5
TVP23AA6NH52 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
TVP23AA6NH52 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TVP23AA6NH52 AC004854.2-201ENST00000608450 1441 ntBASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms