Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC14.42□□□□□ -0.1
TRBV27A0A0K0K1C4 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRBV27A0A0K0K1C4 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRBV27A0A0K0K1C4 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRBV27A0A0K0K1C4 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
TRBV27A0A0K0K1C4 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC14.42□□□□□ -0.1
TRBV27A0A0K0K1C4 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC14.42□□□□□ -0.1
TRBV27A0A0K0K1C4 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRBV27A0A0K0K1C4 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRBV27A0A0K0K1C4 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC14.42□□□□□ -0.1
TRBV27A0A0K0K1C4 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRBV27A0A0K0K1C4 AC105233.4-201ENST00000642045 216 ntBASIC14.42□□□□□ -0.1
TRBV27A0A0K0K1C4 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRBV27A0A0K0K1C4 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRBV27A0A0K0K1C4 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRBV27A0A0K0K1C4 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
TRBV27A0A0K0K1C4 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRBV27A0A0K0K1C4 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
TRBV27A0A0K0K1C4 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRBV27A0A0K0K1C4 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRBV27A0A0K0K1C4 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
TRBV27A0A0K0K1C4 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
TRBV27A0A0K0K1C4 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRBV27A0A0K0K1C4 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRBV27A0A0K0K1C4 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC14.41□□□□□ -0.1
TRBV27A0A0K0K1C4 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRBV27A0A0K0K1C4 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRBV27A0A0K0K1C4 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRBV27A0A0K0K1C4 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC14.41□□□□□ -0.1
TRBV27A0A0K0K1C4 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRBV27A0A0K0K1C4 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRBV27A0A0K0K1C4 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
TRBV27A0A0K0K1C4 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC14.41□□□□□ -0.1
TRBV27A0A0K0K1C4 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRBV27A0A0K0K1C4 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRBV27A0A0K0K1C4 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC14.41□□□□□ -0.1
TRBV27A0A0K0K1C4 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC14.41□□□□□ -0.1
TRBV27A0A0K0K1C4 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRBV27A0A0K0K1C4 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRBV27A0A0K0K1C4 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRBV27A0A0K0K1C4 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRBV27A0A0K0K1C4 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
TRBV27A0A0K0K1C4 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRBV27A0A0K0K1C4 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRBV27A0A0K0K1C4 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRBV27A0A0K0K1C4 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRBV27A0A0K0K1C4 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRBV27A0A0K0K1C4 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
TRBV27A0A0K0K1C4 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
TRBV27A0A0K0K1C4 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRBV27A0A0K0K1C4 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC14.4□□□□□ -0.1
TRBV27A0A0K0K1C4 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC14.4□□□□□ -0.1
TRBV27A0A0K0K1C4 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
TRBV27A0A0K0K1C4 AL158211.5-201ENST00000623583 2518 ntBASIC14.4□□□□□ -0.1
TRBV27A0A0K0K1C4 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRBV27A0A0K0K1C4 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRBV27A0A0K0K1C4 POU5F1P4-201ENST00000413175 1085 ntBASIC14.4□□□□□ -0.1
TRBV27A0A0K0K1C4 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC14.4□□□□□ -0.1
TRBV27A0A0K0K1C4 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRBV27A0A0K0K1C4 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRBV27A0A0K0K1C4 MIR2861-201ENST00000636310 90 ntBASIC14.4□□□□□ -0.1
TRBV27A0A0K0K1C4 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRBV27A0A0K0K1C4 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRBV27A0A0K0K1C4 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRBV27A0A0K0K1C4 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRBV27A0A0K0K1C4 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC14.4□□□□□ -0.1
TRBV27A0A0K0K1C4 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRBV27A0A0K0K1C4 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
TRBV27A0A0K0K1C4 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRBV27A0A0K0K1C4 MFF-207ENST00000409565 1548 ntTSL 2 BASIC14.4□□□□□ -0.1
TRBV27A0A0K0K1C4 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRBV27A0A0K0K1C4 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRBV27A0A0K0K1C4 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC14.4□□□□□ -0.1
TRBV27A0A0K0K1C4 AC098818.2-201ENST00000564925 2320 ntBASIC14.4□□□□□ -0.11
TRBV27A0A0K0K1C4 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV27A0A0K0K1C4 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV27A0A0K0K1C4 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV27A0A0K0K1C4 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV27A0A0K0K1C4 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV27A0A0K0K1C4 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV27A0A0K0K1C4 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV27A0A0K0K1C4 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC14.39□□□□□ -0.11
TRBV27A0A0K0K1C4 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV27A0A0K0K1C4 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC14.39□□□□□ -0.11
TRBV27A0A0K0K1C4 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV27A0A0K0K1C4 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC14.39□□□□□ -0.11
TRBV27A0A0K0K1C4 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV27A0A0K0K1C4 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV27A0A0K0K1C4 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC14.39□□□□□ -0.11
TRBV27A0A0K0K1C4 MIR4767-201ENST00000582827 78 ntBASIC14.39□□□□□ -0.11
TRBV27A0A0K0K1C4 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC14.39□□□□□ -0.11
TRBV27A0A0K0K1C4 AC008175.2-201ENST00000612840 297 ntBASIC14.39□□□□□ -0.11
TRBV27A0A0K0K1C4 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC14.39□□□□□ -0.11
TRBV27A0A0K0K1C4 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
TRBV27A0A0K0K1C4 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV27A0A0K0K1C4 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
TRBV27A0A0K0K1C4 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
TRBV27A0A0K0K1C4 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV27A0A0K0K1C4 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV27A0A0K0K1C4 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms