Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV12-3A0A0B4J271 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC15.16■□□□□ 0.02
TRAV12-3A0A0B4J271 BID-203ENST00000399765 1879 ntTSL 2 BASIC15.16■□□□□ 0.02
TRAV12-3A0A0B4J271 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TRAV12-3A0A0B4J271 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC15.16■□□□□ 0.02
TRAV12-3A0A0B4J271 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV12-3A0A0B4J271 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC15.16■□□□□ 0.02
TRAV12-3A0A0B4J271 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV12-3A0A0B4J271 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV12-3A0A0B4J271 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV12-3A0A0B4J271 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
TRAV12-3A0A0B4J271 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV12-3A0A0B4J271 STAC-204ENST00000457375 1366 ntTSL 2 BASIC15.16■□□□□ 0.02
TRAV12-3A0A0B4J271 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV12-3A0A0B4J271 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV12-3A0A0B4J271 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV12-3A0A0B4J271 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC15.16■□□□□ 0.02
TRAV12-3A0A0B4J271 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC15.16■□□□□ 0.02
TRAV12-3A0A0B4J271 SLC7A5P2-201ENST00000553010 536 ntBASIC15.16■□□□□ 0.02
TRAV12-3A0A0B4J271 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV12-3A0A0B4J271 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV12-3A0A0B4J271 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV12-3A0A0B4J271 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC15.16■□□□□ 0.02
TRAV12-3A0A0B4J271 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TRAV12-3A0A0B4J271 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV12-3A0A0B4J271 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV12-3A0A0B4J271 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV12-3A0A0B4J271 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV12-3A0A0B4J271 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC15.16■□□□□ 0.02
TRAV12-3A0A0B4J271 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV12-3A0A0B4J271 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV12-3A0A0B4J271 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV12-3A0A0B4J271 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
TRAV12-3A0A0B4J271 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
TRAV12-3A0A0B4J271 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
TRAV12-3A0A0B4J271 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV12-3A0A0B4J271 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC15.15■□□□□ 0.02
TRAV12-3A0A0B4J271 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV12-3A0A0B4J271 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV12-3A0A0B4J271 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC15.15■□□□□ 0.02
TRAV12-3A0A0B4J271 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC15.15■□□□□ 0.02
TRAV12-3A0A0B4J271 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV12-3A0A0B4J271 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV12-3A0A0B4J271 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
TRAV12-3A0A0B4J271 LGR4-203ENST00000480977 492 ntTSL 2 BASIC15.15■□□□□ 0.02
TRAV12-3A0A0B4J271 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC15.15■□□□□ 0.02
TRAV12-3A0A0B4J271 KRT18P14-201ENST00000534205 1250 ntBASIC15.15■□□□□ 0.02
TRAV12-3A0A0B4J271 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC15.15■□□□□ 0.02
TRAV12-3A0A0B4J271 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC15.15■□□□□ 0.02
TRAV12-3A0A0B4J271 CCDC92B-201ENST00000575506 885 ntBASIC15.15■□□□□ 0.02
TRAV12-3A0A0B4J271 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC15.15■□□□□ 0.02
TRAV12-3A0A0B4J271 RARRES2P11-201ENST00000635158 484 ntBASIC15.15■□□□□ 0.02
TRAV12-3A0A0B4J271 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TRAV12-3A0A0B4J271 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
TRAV12-3A0A0B4J271 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV12-3A0A0B4J271 AL391422.3-201ENST00000603791 2761 ntBASIC15.15■□□□□ 0.02
TRAV12-3A0A0B4J271 HCG11-201ENST00000411553 5696 ntBASIC15.15■□□□□ 0.02
TRAV12-3A0A0B4J271 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV12-3A0A0B4J271 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV12-3A0A0B4J271 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC15.15■□□□□ 0.02
TRAV12-3A0A0B4J271 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV12-3A0A0B4J271 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
TRAV12-3A0A0B4J271 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC15.15■□□□□ 0.02
TRAV12-3A0A0B4J271 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV12-3A0A0B4J271 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV12-3A0A0B4J271 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC15.14■□□□□ 0.01
TRAV12-3A0A0B4J271 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV12-3A0A0B4J271 PCDHAC2-203ENST00000615316 3011 ntBASIC15.14■□□□□ 0.01
TRAV12-3A0A0B4J271 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC15.14■□□□□ 0.01
TRAV12-3A0A0B4J271 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TRAV12-3A0A0B4J271 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC15.14■□□□□ 0.01
TRAV12-3A0A0B4J271 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
TRAV12-3A0A0B4J271 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
TRAV12-3A0A0B4J271 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV12-3A0A0B4J271 ZNRF2P3-201ENST00000424200 374 ntBASIC15.14■□□□□ 0.01
TRAV12-3A0A0B4J271 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC15.14■□□□□ 0.01
TRAV12-3A0A0B4J271 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC15.14■□□□□ 0.01
TRAV12-3A0A0B4J271 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC15.14■□□□□ 0.01
TRAV12-3A0A0B4J271 RAB43-208ENST00000615093 783 ntTSL 5 BASIC15.14■□□□□ 0.01
TRAV12-3A0A0B4J271 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
TRAV12-3A0A0B4J271 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC15.14■□□□□ 0.01
TRAV12-3A0A0B4J271 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TRAV12-3A0A0B4J271 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC15.14■□□□□ 0.01
TRAV12-3A0A0B4J271 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV12-3A0A0B4J271 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC15.14■□□□□ 0.01
TRAV12-3A0A0B4J271 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV12-3A0A0B4J271 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC15.14■□□□□ 0.01
TRAV12-3A0A0B4J271 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV12-3A0A0B4J271 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV12-3A0A0B4J271 AC020907.5-201ENST00000624372 1936 ntBASIC15.13■□□□□ 0.01
TRAV12-3A0A0B4J271 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
TRAV12-3A0A0B4J271 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TRAV12-3A0A0B4J271 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV12-3A0A0B4J271 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAV12-3A0A0B4J271 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV12-3A0A0B4J271 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV12-3A0A0B4J271 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV12-3A0A0B4J271 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV12-3A0A0B4J271 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV12-3A0A0B4J271 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms