Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC14.21□□□□□ -0.13
TRAV13-1A0A0B4J241 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV13-1A0A0B4J241 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
TRAV13-1A0A0B4J241 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV13-1A0A0B4J241 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
TRAV13-1A0A0B4J241 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC14.21□□□□□ -0.13
TRAV13-1A0A0B4J241 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
TRAV13-1A0A0B4J241 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV13-1A0A0B4J241 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV13-1A0A0B4J241 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV13-1A0A0B4J241 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV13-1A0A0B4J241 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
TRAV13-1A0A0B4J241 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
TRAV13-1A0A0B4J241 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC14.21□□□□□ -0.13
TRAV13-1A0A0B4J241 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV13-1A0A0B4J241 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
TRAV13-1A0A0B4J241 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV13-1A0A0B4J241 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV13-1A0A0B4J241 AC007952.6-201ENST00000573168 2673 ntBASIC14.21□□□□□ -0.13
TRAV13-1A0A0B4J241 AC003957.1-201ENST00000625108 2673 ntBASIC14.21□□□□□ -0.13
TRAV13-1A0A0B4J241 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV13-1A0A0B4J241 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC14.21□□□□□ -0.14
TRAV13-1A0A0B4J241 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
TRAV13-1A0A0B4J241 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRAV13-1A0A0B4J241 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
TRAV13-1A0A0B4J241 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV13-1A0A0B4J241 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC14.2□□□□□ -0.14
TRAV13-1A0A0B4J241 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV13-1A0A0B4J241 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
TRAV13-1A0A0B4J241 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
TRAV13-1A0A0B4J241 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV13-1A0A0B4J241 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV13-1A0A0B4J241 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC14.2□□□□□ -0.14
TRAV13-1A0A0B4J241 FXN-202ENST00000396364 980 ntTSL 5 BASIC14.2□□□□□ -0.14
TRAV13-1A0A0B4J241 BX842568.3-201ENST00000418104 571 ntBASIC14.2□□□□□ -0.14
TRAV13-1A0A0B4J241 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC14.2□□□□□ -0.14
TRAV13-1A0A0B4J241 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC14.2□□□□□ -0.14
TRAV13-1A0A0B4J241 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV13-1A0A0B4J241 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC14.2□□□□□ -0.14
TRAV13-1A0A0B4J241 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV13-1A0A0B4J241 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC14.2□□□□□ -0.14
TRAV13-1A0A0B4J241 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV13-1A0A0B4J241 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV13-1A0A0B4J241 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
TRAV13-1A0A0B4J241 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV13-1A0A0B4J241 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV13-1A0A0B4J241 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV13-1A0A0B4J241 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV13-1A0A0B4J241 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
TRAV13-1A0A0B4J241 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC14.19□□□□□ -0.14
TRAV13-1A0A0B4J241 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV13-1A0A0B4J241 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV13-1A0A0B4J241 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV13-1A0A0B4J241 MIR4767-201ENST00000582827 78 ntBASIC14.19□□□□□ -0.14
TRAV13-1A0A0B4J241 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC14.19□□□□□ -0.14
TRAV13-1A0A0B4J241 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC14.19□□□□□ -0.14
TRAV13-1A0A0B4J241 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV13-1A0A0B4J241 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
TRAV13-1A0A0B4J241 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV13-1A0A0B4J241 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC14.19□□□□□ -0.14
TRAV13-1A0A0B4J241 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC14.19□□□□□ -0.14
TRAV13-1A0A0B4J241 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
TRAV13-1A0A0B4J241 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
TRAV13-1A0A0B4J241 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV13-1A0A0B4J241 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV13-1A0A0B4J241 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
TRAV13-1A0A0B4J241 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV13-1A0A0B4J241 BID-203ENST00000399765 1879 ntTSL 2 BASIC14.18□□□□□ -0.14
TRAV13-1A0A0B4J241 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC14.18□□□□□ -0.14
TRAV13-1A0A0B4J241 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV13-1A0A0B4J241 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV13-1A0A0B4J241 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV13-1A0A0B4J241 DET1-207ENST00000564406 2315 ntTSL 2 BASIC14.18□□□□□ -0.14
TRAV13-1A0A0B4J241 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
TRAV13-1A0A0B4J241 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV13-1A0A0B4J241 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC14.18□□□□□ -0.14
TRAV13-1A0A0B4J241 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV13-1A0A0B4J241 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV13-1A0A0B4J241 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV13-1A0A0B4J241 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV13-1A0A0B4J241 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC14.18□□□□□ -0.14
TRAV13-1A0A0B4J241 AC131281.2-201ENST00000520478 145 ntBASIC14.18□□□□□ -0.14
TRAV13-1A0A0B4J241 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC14.18□□□□□ -0.14
TRAV13-1A0A0B4J241 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC14.18□□□□□ -0.14
TRAV13-1A0A0B4J241 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV13-1A0A0B4J241 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV13-1A0A0B4J241 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC14.18□□□□□ -0.14
TRAV13-1A0A0B4J241 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
TRAV13-1A0A0B4J241 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC14.18□□□□□ -0.14
TRAV13-1A0A0B4J241 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
TRAV13-1A0A0B4J241 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV13-1A0A0B4J241 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
TRAV13-1A0A0B4J241 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV13-1A0A0B4J241 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV13-1A0A0B4J241 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV13-1A0A0B4J241 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV13-1A0A0B4J241 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
TRAV13-1A0A0B4J241 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV13-1A0A0B4J241 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC14.17□□□□□ -0.14
TRAV13-1A0A0B4J241 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms