Protein–RNA interactions for Protein: A0A0B4J237

TRAV8-2, T-cell receptor alpha variable 8-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-2A0A0B4J237 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC15.49■□□□□ 0.07
TRAV8-2A0A0B4J237 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC15.49■□□□□ 0.07
TRAV8-2A0A0B4J237 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC15.49■□□□□ 0.07
TRAV8-2A0A0B4J237 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC15.49■□□□□ 0.07
TRAV8-2A0A0B4J237 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC15.49■□□□□ 0.07
TRAV8-2A0A0B4J237 SP2-202ENST00000613139 908 ntTSL 5 BASIC15.49■□□□□ 0.07
TRAV8-2A0A0B4J237 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV8-2A0A0B4J237 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV8-2A0A0B4J237 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
TRAV8-2A0A0B4J237 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV8-2A0A0B4J237 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
TRAV8-2A0A0B4J237 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV8-2A0A0B4J237 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV8-2A0A0B4J237 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV8-2A0A0B4J237 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV8-2A0A0B4J237 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV8-2A0A0B4J237 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV8-2A0A0B4J237 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV8-2A0A0B4J237 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV8-2A0A0B4J237 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV8-2A0A0B4J237 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV8-2A0A0B4J237 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV8-2A0A0B4J237 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV8-2A0A0B4J237 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC15.48■□□□□ 0.07
TRAV8-2A0A0B4J237 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV8-2A0A0B4J237 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV8-2A0A0B4J237 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV8-2A0A0B4J237 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC15.48■□□□□ 0.07
TRAV8-2A0A0B4J237 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC15.48■□□□□ 0.07
TRAV8-2A0A0B4J237 CCDC92B-201ENST00000575506 885 ntBASIC15.48■□□□□ 0.07
TRAV8-2A0A0B4J237 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC15.48■□□□□ 0.07
TRAV8-2A0A0B4J237 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC15.48■□□□□ 0.07
TRAV8-2A0A0B4J237 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV8-2A0A0B4J237 AL391422.3-201ENST00000603791 2761 ntBASIC15.48■□□□□ 0.07
TRAV8-2A0A0B4J237 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
TRAV8-2A0A0B4J237 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV8-2A0A0B4J237 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV8-2A0A0B4J237 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC15.48■□□□□ 0.07
TRAV8-2A0A0B4J237 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
TRAV8-2A0A0B4J237 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV8-2A0A0B4J237 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC15.48■□□□□ 0.07
TRAV8-2A0A0B4J237 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV8-2A0A0B4J237 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV8-2A0A0B4J237 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC15.47■□□□□ 0.07
TRAV8-2A0A0B4J237 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV8-2A0A0B4J237 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC15.47■□□□□ 0.07
TRAV8-2A0A0B4J237 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
TRAV8-2A0A0B4J237 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV8-2A0A0B4J237 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
TRAV8-2A0A0B4J237 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV8-2A0A0B4J237 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
TRAV8-2A0A0B4J237 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV8-2A0A0B4J237 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC15.47■□□□□ 0.07
TRAV8-2A0A0B4J237 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC15.47■□□□□ 0.07
TRAV8-2A0A0B4J237 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC15.47■□□□□ 0.07
TRAV8-2A0A0B4J237 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV8-2A0A0B4J237 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV8-2A0A0B4J237 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC15.47■□□□□ 0.07
TRAV8-2A0A0B4J237 KRT18P14-201ENST00000534205 1250 ntBASIC15.47■□□□□ 0.07
TRAV8-2A0A0B4J237 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
TRAV8-2A0A0B4J237 TESC-206ENST00000541210 936 ntTSL 3 BASIC15.47■□□□□ 0.07
TRAV8-2A0A0B4J237 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC15.47■□□□□ 0.07
TRAV8-2A0A0B4J237 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC15.47■□□□□ 0.07
TRAV8-2A0A0B4J237 RAB43-208ENST00000615093 783 ntTSL 5 BASIC15.47■□□□□ 0.07
TRAV8-2A0A0B4J237 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV8-2A0A0B4J237 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC15.47■□□□□ 0.07
TRAV8-2A0A0B4J237 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV8-2A0A0B4J237 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC15.47■□□□□ 0.07
TRAV8-2A0A0B4J237 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC15.47■□□□□ 0.07
TRAV8-2A0A0B4J237 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV8-2A0A0B4J237 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV8-2A0A0B4J237 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV8-2A0A0B4J237 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC15.47■□□□□ 0.07
TRAV8-2A0A0B4J237 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV8-2A0A0B4J237 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC15.47■□□□□ 0.07
TRAV8-2A0A0B4J237 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
TRAV8-2A0A0B4J237 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV8-2A0A0B4J237 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV8-2A0A0B4J237 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
TRAV8-2A0A0B4J237 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV8-2A0A0B4J237 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV8-2A0A0B4J237 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV8-2A0A0B4J237 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV8-2A0A0B4J237 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV8-2A0A0B4J237 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV8-2A0A0B4J237 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV8-2A0A0B4J237 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV8-2A0A0B4J237 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV8-2A0A0B4J237 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV8-2A0A0B4J237 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC15.46■□□□□ 0.07
TRAV8-2A0A0B4J237 AC004854.2-201ENST00000608450 1441 ntBASIC15.46■□□□□ 0.07
TRAV8-2A0A0B4J237 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV8-2A0A0B4J237 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV8-2A0A0B4J237 COX20-201ENST00000366528 568 ntTSL 2 BASIC15.46■□□□□ 0.07
TRAV8-2A0A0B4J237 PTPA-214ENST00000423100 988 ntTSL 2 BASIC15.46■□□□□ 0.07
TRAV8-2A0A0B4J237 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
TRAV8-2A0A0B4J237 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC15.46■□□□□ 0.07
TRAV8-2A0A0B4J237 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
TRAV8-2A0A0B4J237 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
TRAV8-2A0A0B4J237 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms