Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC14.42□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 PARN-205ENST00000539279 1557 ntTSL 2 BASIC14.42□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC14.41□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 MIR6084-201ENST00000622012 110 ntBASIC14.41□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC14.41□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC14.41□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 AC087289.5-201ENST00000586076 3175 ntBASIC14.4□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC14.4□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC14.4□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC14.4□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC14.4□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC14.4□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC14.4□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC14.4□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC14.4□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 SP2-202ENST00000613139 908 ntTSL 5 BASIC14.4□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC14.4□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC14.4□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC14.4□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC14.4□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC14.4□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC14.4□□□□□ -0.1
TRAV8-3A0A0A6YYJ7 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC14.39□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC14.39□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms