Protein–RNA interactions for Protein: Q9Y663

HS3ST3A1, Heparan sulfate glucosamine 3-O-sulfotransferase 3A1, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST3A1Q9Y663 LINC01971-201ENST00000617888 1048 ntBASIC26.16■■□□□ 1.78
HS3ST3A1Q9Y663 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
HS3ST3A1Q9Y663 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC26.15■■□□□ 1.78
HS3ST3A1Q9Y663 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
HS3ST3A1Q9Y663 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
HS3ST3A1Q9Y663 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC26.14■■□□□ 1.77
HS3ST3A1Q9Y663 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
HS3ST3A1Q9Y663 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC26.12■■□□□ 1.77
HS3ST3A1Q9Y663 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
HS3ST3A1Q9Y663 RNF166-209ENST00000567844 633 ntTSL 5 BASIC26.12■■□□□ 1.77
HS3ST3A1Q9Y663 EI24-212ENST00000615917 1407 ntTSL 2 BASIC26.12■■□□□ 1.77
HS3ST3A1Q9Y663 DUX4L11-201ENST00000611504 1267 ntBASIC26.11■■□□□ 1.77
HS3ST3A1Q9Y663 DUX4L12-201ENST00000614593 1267 ntBASIC26.11■■□□□ 1.77
HS3ST3A1Q9Y663 DUX4L14-201ENST00000621227 1267 ntBASIC26.11■■□□□ 1.77
HS3ST3A1Q9Y663 AGPS-202ENST00000409888 815 ntTSL 4 BASIC26.1■■□□□ 1.77
HS3ST3A1Q9Y663 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
HS3ST3A1Q9Y663 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC26.09■■□□□ 1.77
HS3ST3A1Q9Y663 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC26.09■■□□□ 1.77
HS3ST3A1Q9Y663 MIR3648-2-201ENST00000581792 180 ntBASIC26.09■■□□□ 1.77
HS3ST3A1Q9Y663 MIR3648-1-201ENST00000615959 180 ntBASIC26.09■■□□□ 1.77
HS3ST3A1Q9Y663 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
HS3ST3A1Q9Y663 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
HS3ST3A1Q9Y663 MIR639-201ENST00000384974 98 ntBASIC26.07■■□□□ 1.76
HS3ST3A1Q9Y663 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC26.06■■□□□ 1.76
HS3ST3A1Q9Y663 RPS2-202ENST00000526522 924 ntTSL 2 BASIC26.06■■□□□ 1.76
HS3ST3A1Q9Y663 GDI1-215ENST00000630693 786 ntTSL 4 BASIC26.06■■□□□ 1.76
HS3ST3A1Q9Y663 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC26.06■■□□□ 1.76
HS3ST3A1Q9Y663 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC26.05■■□□□ 1.76
HS3ST3A1Q9Y663 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
HS3ST3A1Q9Y663 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC26.05■■□□□ 1.76
HS3ST3A1Q9Y663 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
HS3ST3A1Q9Y663 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC26.03■■□□□ 1.76
HS3ST3A1Q9Y663 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC26.02■■□□□ 1.76
HS3ST3A1Q9Y663 AC016575.1-201ENST00000607026 382 ntBASIC26.02■■□□□ 1.76
HS3ST3A1Q9Y663 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC26.01■■□□□ 1.75
HS3ST3A1Q9Y663 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
HS3ST3A1Q9Y663 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
HS3ST3A1Q9Y663 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC26.01■■□□□ 1.75
HS3ST3A1Q9Y663 MIR4449-201ENST00000578365 66 ntBASIC26.01■■□□□ 1.75
HS3ST3A1Q9Y663 AC010864.1-201ENST00000609407 1511 ntBASIC26.01■■□□□ 1.75
HS3ST3A1Q9Y663 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
HS3ST3A1Q9Y663 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
HS3ST3A1Q9Y663 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC26■■□□□ 1.75
HS3ST3A1Q9Y663 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
HS3ST3A1Q9Y663 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC26■■□□□ 1.75
HS3ST3A1Q9Y663 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC26■■□□□ 1.75
HS3ST3A1Q9Y663 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
HS3ST3A1Q9Y663 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
HS3ST3A1Q9Y663 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
HS3ST3A1Q9Y663 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC25.98■■□□□ 1.75
HS3ST3A1Q9Y663 CALM3-209ENST00000597743 577 ntTSL 4 BASIC25.98■■□□□ 1.75
HS3ST3A1Q9Y663 CR559946.2-201ENST00000623684 991 ntBASIC25.98■■□□□ 1.75
HS3ST3A1Q9Y663 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
HS3ST3A1Q9Y663 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
HS3ST3A1Q9Y663 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
HS3ST3A1Q9Y663 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
HS3ST3A1Q9Y663 DUX4L13-201ENST00000554103 1267 ntBASIC25.95■■□□□ 1.74
HS3ST3A1Q9Y663 DUX4L15-201ENST00000611059 1267 ntBASIC25.95■■□□□ 1.74
HS3ST3A1Q9Y663 DUX4L23-201ENST00000615195 1269 ntBASIC25.95■■□□□ 1.74
HS3ST3A1Q9Y663 DUX4L24-201ENST00000617576 1269 ntBASIC25.95■■□□□ 1.74
HS3ST3A1Q9Y663 DUX4L22-201ENST00000618238 1269 ntBASIC25.95■■□□□ 1.74
HS3ST3A1Q9Y663 DUX4L20-201ENST00000619712 1269 ntBASIC25.95■■□□□ 1.74
HS3ST3A1Q9Y663 DUX4L21-201ENST00000622058 1269 ntBASIC25.95■■□□□ 1.74
HS3ST3A1Q9Y663 DUX4L10-201ENST00000622460 1267 ntBASIC25.95■■□□□ 1.74
HS3ST3A1Q9Y663 DUX4L25-201ENST00000624915 1269 ntBASIC25.95■■□□□ 1.74
HS3ST3A1Q9Y663 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
HS3ST3A1Q9Y663 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
HS3ST3A1Q9Y663 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
HS3ST3A1Q9Y663 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
HS3ST3A1Q9Y663 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
HS3ST3A1Q9Y663 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
HS3ST3A1Q9Y663 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
HS3ST3A1Q9Y663 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC25.91■■□□□ 1.74
HS3ST3A1Q9Y663 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
HS3ST3A1Q9Y663 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC25.9■■□□□ 1.74
HS3ST3A1Q9Y663 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC25.89■■□□□ 1.74
HS3ST3A1Q9Y663 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC25.89■■□□□ 1.74
HS3ST3A1Q9Y663 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC25.88■■□□□ 1.73
HS3ST3A1Q9Y663 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
HS3ST3A1Q9Y663 LINC00273-201ENST00000539813 1452 ntBASIC25.88■■□□□ 1.73
HS3ST3A1Q9Y663 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC25.88■■□□□ 1.73
HS3ST3A1Q9Y663 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC25.88■■□□□ 1.73
HS3ST3A1Q9Y663 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
HS3ST3A1Q9Y663 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC25.88■■□□□ 1.73
HS3ST3A1Q9Y663 CHML-204ENST00000638121 920 ntTSL 2 BASIC25.88■■□□□ 1.73
HS3ST3A1Q9Y663 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC25.88■■□□□ 1.73
HS3ST3A1Q9Y663 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
HS3ST3A1Q9Y663 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
HS3ST3A1Q9Y663 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
HS3ST3A1Q9Y663 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
HS3ST3A1Q9Y663 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
HS3ST3A1Q9Y663 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
HS3ST3A1Q9Y663 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC25.86■■□□□ 1.73
HS3ST3A1Q9Y663 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC25.86■■□□□ 1.73
HS3ST3A1Q9Y663 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC25.85■■□□□ 1.73
HS3ST3A1Q9Y663 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
HS3ST3A1Q9Y663 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
HS3ST3A1Q9Y663 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC25.84■■□□□ 1.73
HS3ST3A1Q9Y663 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
HS3ST3A1Q9Y663 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms