Protein–RNA interactions for Protein: Q9UJ98

STAG3, Cohesin subunit SA-3, humanhuman

Predictions only

Length 1,225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG3Q9UJ98 HES6-205ENST00000409356 528 ntTSL 2 BASIC38.65■■■■□ 3.78
STAG3Q9UJ98 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC38.65■■■■□ 3.78
STAG3Q9UJ98 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC38.62■■■■□ 3.77
STAG3Q9UJ98 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC38.62■■■■□ 3.77
STAG3Q9UJ98 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC38.61■■■■□ 3.77
STAG3Q9UJ98 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC38.61■■■■□ 3.77
STAG3Q9UJ98 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC38.6■■■■□ 3.77
STAG3Q9UJ98 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC38.59■■■■□ 3.77
STAG3Q9UJ98 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC38.59■■■■□ 3.77
STAG3Q9UJ98 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC38.58■■■■□ 3.77
STAG3Q9UJ98 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC38.58■■■■□ 3.77
STAG3Q9UJ98 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC38.57■■■■□ 3.76
STAG3Q9UJ98 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC38.56■■■■□ 3.76
STAG3Q9UJ98 CHML-204ENST00000638121 920 ntTSL 2 BASIC38.55■■■■□ 3.76
STAG3Q9UJ98 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC38.55■■■■□ 3.76
STAG3Q9UJ98 EI24-212ENST00000615917 1407 ntTSL 2 BASIC38.55■■■■□ 3.76
STAG3Q9UJ98 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC38.54■■■■□ 3.76
STAG3Q9UJ98 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC38.54■■■■□ 3.76
STAG3Q9UJ98 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC38.53■■■■□ 3.76
STAG3Q9UJ98 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC38.53■■■■□ 3.76
STAG3Q9UJ98 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC38.52■■■■□ 3.76
STAG3Q9UJ98 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC38.51■■■■□ 3.76
STAG3Q9UJ98 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC38.5■■■■□ 3.75
STAG3Q9UJ98 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC38.47■■■■□ 3.75
STAG3Q9UJ98 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC38.47■■■■□ 3.75
STAG3Q9UJ98 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC38.47■■■■□ 3.75
STAG3Q9UJ98 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC38.46■■■■□ 3.75
STAG3Q9UJ98 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC38.45■■■■□ 3.75
STAG3Q9UJ98 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC38.45■■■■□ 3.75
STAG3Q9UJ98 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC38.45■■■■□ 3.75
STAG3Q9UJ98 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC38.45■■■■□ 3.75
STAG3Q9UJ98 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC38.45■■■■□ 3.75
STAG3Q9UJ98 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC38.45■■■■□ 3.75
STAG3Q9UJ98 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC38.45■■■■□ 3.75
STAG3Q9UJ98 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC38.45■■■■□ 3.75
STAG3Q9UJ98 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC38.44■■■■□ 3.74
STAG3Q9UJ98 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC38.43■■■■□ 3.74
STAG3Q9UJ98 RARRES2P2-201ENST00000394842 485 ntBASIC38.43■■■■□ 3.74
STAG3Q9UJ98 SRP68-213ENST00000629930 165 ntTSL 5 BASIC38.43■■■■□ 3.74
STAG3Q9UJ98 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC38.42■■■■□ 3.74
STAG3Q9UJ98 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC38.39■■■■□ 3.74
STAG3Q9UJ98 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC38.39■■■■□ 3.74
STAG3Q9UJ98 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC38.38■■■■□ 3.74
STAG3Q9UJ98 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC38.38■■■■□ 3.74
STAG3Q9UJ98 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC38.37■■■■□ 3.73
STAG3Q9UJ98 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC38.37■■■■□ 3.73
STAG3Q9UJ98 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC38.37■■■■□ 3.73
STAG3Q9UJ98 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC38.36■■■■□ 3.73
STAG3Q9UJ98 CHST11-202ENST00000546689 756 ntTSL 2 BASIC38.34■■■■□ 3.73
STAG3Q9UJ98 ABHD17AP5-201ENST00000580133 923 ntBASIC38.34■■■■□ 3.73
STAG3Q9UJ98 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC38.33■■■■□ 3.73
STAG3Q9UJ98 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC38.32■■■■□ 3.72
STAG3Q9UJ98 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC38.32■■■■□ 3.72
STAG3Q9UJ98 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC38.32■■■■□ 3.72
STAG3Q9UJ98 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC38.32■■■■□ 3.72
STAG3Q9UJ98 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC38.31■■■■□ 3.72
STAG3Q9UJ98 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC38.3■■■■□ 3.72
STAG3Q9UJ98 GPX1-201ENST00000419349 1106 ntBASIC38.3■■■■□ 3.72
STAG3Q9UJ98 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC38.29■■■■□ 3.72
STAG3Q9UJ98 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC38.29■■■■□ 3.72
STAG3Q9UJ98 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC38.29■■■■□ 3.72
STAG3Q9UJ98 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC38.29■■■■□ 3.72
STAG3Q9UJ98 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC38.29■■■■□ 3.72
STAG3Q9UJ98 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC38.28■■■■□ 3.72
STAG3Q9UJ98 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC38.28■■■■□ 3.72
STAG3Q9UJ98 TPT1-202ENST00000379055 948 ntTSL 2 BASIC38.27■■■■□ 3.72
STAG3Q9UJ98 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC38.27■■■■□ 3.72
STAG3Q9UJ98 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC38.26■■■■□ 3.72
STAG3Q9UJ98 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC38.25■■■■□ 3.71
STAG3Q9UJ98 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC38.25■■■■□ 3.71
STAG3Q9UJ98 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC38.24■■■■□ 3.71
STAG3Q9UJ98 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC38.23■■■■□ 3.71
STAG3Q9UJ98 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC38.23■■■■□ 3.71
STAG3Q9UJ98 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC38.23■■■■□ 3.71
STAG3Q9UJ98 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC38.22■■■■□ 3.71
STAG3Q9UJ98 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC38.21■■■■□ 3.71
STAG3Q9UJ98 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC38.21■■■■□ 3.71
STAG3Q9UJ98 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC38.2■■■■□ 3.71
STAG3Q9UJ98 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC38.2■■■■□ 3.71
STAG3Q9UJ98 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC38.2■■■■□ 3.71
STAG3Q9UJ98 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC38.2■■■■□ 3.71
STAG3Q9UJ98 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC38.19■■■■□ 3.7
STAG3Q9UJ98 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC38.19■■■■□ 3.7
STAG3Q9UJ98 RNF126P1-201ENST00000567452 1320 ntBASIC38.18■■■■□ 3.7
STAG3Q9UJ98 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC38.18■■■■□ 3.7
STAG3Q9UJ98 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC38.17■■■■□ 3.7
STAG3Q9UJ98 AC120057.4-201ENST00000624722 1615 ntBASIC38.17■■■■□ 3.7
STAG3Q9UJ98 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC38.17■■■■□ 3.7
STAG3Q9UJ98 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC38.17■■■■□ 3.7
STAG3Q9UJ98 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC38.16■■■■□ 3.7
STAG3Q9UJ98 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC38.16■■■■□ 3.7
STAG3Q9UJ98 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC38.16■■■■□ 3.7
STAG3Q9UJ98 CEP120-209ENST00000515110 606 ntTSL 3 BASIC38.16■■■■□ 3.7
STAG3Q9UJ98 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC38.15■■■■□ 3.7
STAG3Q9UJ98 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC38.15■■■■□ 3.7
STAG3Q9UJ98 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC38.14■■■■□ 3.7
STAG3Q9UJ98 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC38.14■■■■□ 3.7
STAG3Q9UJ98 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC38.13■■■■□ 3.69
STAG3Q9UJ98 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC38.13■■■■□ 3.69
STAG3Q9UJ98 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC38.12■■■■□ 3.69
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms