Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
LRFN1Q9P244 HLA-V-202ENST00000446817 847 ntBASIC24.22■■□□□ 1.47
LRFN1Q9P244 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
LRFN1Q9P244 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
LRFN1Q9P244 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
LRFN1Q9P244 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
LRFN1Q9P244 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC24.2■■□□□ 1.46
LRFN1Q9P244 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC24.2■■□□□ 1.46
LRFN1Q9P244 MBP-237ENST00000579129 1052 ntTSL 5 BASIC24.2■■□□□ 1.46
LRFN1Q9P244 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
LRFN1Q9P244 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC24.19■■□□□ 1.46
LRFN1Q9P244 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
LRFN1Q9P244 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
LRFN1Q9P244 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
LRFN1Q9P244 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
LRFN1Q9P244 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
LRFN1Q9P244 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC24.17■■□□□ 1.46
LRFN1Q9P244 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC24.17■■□□□ 1.46
LRFN1Q9P244 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
LRFN1Q9P244 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
LRFN1Q9P244 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
LRFN1Q9P244 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC24.14■■□□□ 1.45
LRFN1Q9P244 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
LRFN1Q9P244 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
LRFN1Q9P244 EI24-212ENST00000615917 1407 ntTSL 2 BASIC24.13■■□□□ 1.45
LRFN1Q9P244 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
LRFN1Q9P244 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC24.12■■□□□ 1.45
LRFN1Q9P244 LINC01971-201ENST00000617888 1048 ntBASIC24.12■■□□□ 1.45
LRFN1Q9P244 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC24.12■■□□□ 1.45
LRFN1Q9P244 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
LRFN1Q9P244 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC24.11■■□□□ 1.45
LRFN1Q9P244 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC24.1■■□□□ 1.45
LRFN1Q9P244 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC24.1■■□□□ 1.45
LRFN1Q9P244 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
LRFN1Q9P244 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC24.1■■□□□ 1.45
LRFN1Q9P244 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
LRFN1Q9P244 RNF166-209ENST00000567844 633 ntTSL 5 BASIC24.09■■□□□ 1.45
LRFN1Q9P244 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC24.09■■□□□ 1.45
LRFN1Q9P244 AC010864.1-201ENST00000609407 1511 ntBASIC24.09■■□□□ 1.45
LRFN1Q9P244 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC24.08■■□□□ 1.45
LRFN1Q9P244 MACF1-219ENST00000484793 834 ntTSL 2 BASIC24.08■■□□□ 1.45
LRFN1Q9P244 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
LRFN1Q9P244 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
LRFN1Q9P244 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
LRFN1Q9P244 DUX4L11-201ENST00000611504 1267 ntBASIC24.07■■□□□ 1.44
LRFN1Q9P244 DUX4L12-201ENST00000614593 1267 ntBASIC24.07■■□□□ 1.44
LRFN1Q9P244 DUX4L14-201ENST00000621227 1267 ntBASIC24.07■■□□□ 1.44
LRFN1Q9P244 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
LRFN1Q9P244 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC24.04■■□□□ 1.44
LRFN1Q9P244 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
LRFN1Q9P244 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC24.03■■□□□ 1.44
LRFN1Q9P244 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC24.03■■□□□ 1.44
LRFN1Q9P244 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
LRFN1Q9P244 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
LRFN1Q9P244 AGPS-202ENST00000409888 815 ntTSL 4 BASIC24.02■■□□□ 1.44
LRFN1Q9P244 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC24.02■■□□□ 1.44
LRFN1Q9P244 MIR3648-2-201ENST00000581792 180 ntBASIC24.02■■□□□ 1.44
LRFN1Q9P244 MIR3648-1-201ENST00000615959 180 ntBASIC24.02■■□□□ 1.44
LRFN1Q9P244 GDI1-215ENST00000630693 786 ntTSL 4 BASIC24.02■■□□□ 1.44
LRFN1Q9P244 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
LRFN1Q9P244 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
LRFN1Q9P244 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
LRFN1Q9P244 RPS2-202ENST00000526522 924 ntTSL 2 BASIC24.01■■□□□ 1.43
LRFN1Q9P244 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
LRFN1Q9P244 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
LRFN1Q9P244 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC24■■□□□ 1.43
LRFN1Q9P244 AC016575.1-201ENST00000607026 382 ntBASIC24■■□□□ 1.43
LRFN1Q9P244 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC24■■□□□ 1.43
LRFN1Q9P244 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC23.99■■□□□ 1.43
LRFN1Q9P244 CALM3-209ENST00000597743 577 ntTSL 4 BASIC23.98■■□□□ 1.43
LRFN1Q9P244 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC23.98■■□□□ 1.43
LRFN1Q9P244 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
LRFN1Q9P244 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC23.97■■□□□ 1.43
LRFN1Q9P244 MIR639-201ENST00000384974 98 ntBASIC23.97■■□□□ 1.43
LRFN1Q9P244 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC23.97■■□□□ 1.43
LRFN1Q9P244 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
LRFN1Q9P244 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
LRFN1Q9P244 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC23.96■■□□□ 1.43
LRFN1Q9P244 CR559946.2-201ENST00000623684 991 ntBASIC23.96■■□□□ 1.43
LRFN1Q9P244 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
LRFN1Q9P244 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
LRFN1Q9P244 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
LRFN1Q9P244 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
LRFN1Q9P244 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
LRFN1Q9P244 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
LRFN1Q9P244 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
LRFN1Q9P244 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
LRFN1Q9P244 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC23.93■■□□□ 1.42
LRFN1Q9P244 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
LRFN1Q9P244 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC23.92■■□□□ 1.42
LRFN1Q9P244 AL135925.1-201ENST00000605920 1701 ntBASIC23.92■■□□□ 1.42
LRFN1Q9P244 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
LRFN1Q9P244 DUX4L13-201ENST00000554103 1267 ntBASIC23.91■■□□□ 1.42
LRFN1Q9P244 DUX4L15-201ENST00000611059 1267 ntBASIC23.91■■□□□ 1.42
LRFN1Q9P244 DUX4L23-201ENST00000615195 1269 ntBASIC23.91■■□□□ 1.42
LRFN1Q9P244 DUX4L24-201ENST00000617576 1269 ntBASIC23.91■■□□□ 1.42
LRFN1Q9P244 DUX4L22-201ENST00000618238 1269 ntBASIC23.91■■□□□ 1.42
LRFN1Q9P244 DUX4L20-201ENST00000619712 1269 ntBASIC23.91■■□□□ 1.42
LRFN1Q9P244 DUX4L21-201ENST00000622058 1269 ntBASIC23.91■■□□□ 1.42
LRFN1Q9P244 DUX4L10-201ENST00000622460 1267 ntBASIC23.91■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms