Protein–RNA interactions for Protein: Q9HCP0

CSNK1G1, Casein kinase I isoform gamma-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G1Q9HCP0 AC010864.1-201ENST00000609407 1511 ntBASIC27.84■■■□□ 2.05
CSNK1G1Q9HCP0 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
CSNK1G1Q9HCP0 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
CSNK1G1Q9HCP0 AL135925.1-201ENST00000605920 1701 ntBASIC27.82■■■□□ 2.04
CSNK1G1Q9HCP0 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
CSNK1G1Q9HCP0 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
CSNK1G1Q9HCP0 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
CSNK1G1Q9HCP0 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC27.79■■■□□ 2.04
CSNK1G1Q9HCP0 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
CSNK1G1Q9HCP0 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC27.79■■■□□ 2.04
CSNK1G1Q9HCP0 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC27.78■■■□□ 2.04
CSNK1G1Q9HCP0 MLEC-202ENST00000412616 841 ntTSL 3 BASIC27.78■■■□□ 2.04
CSNK1G1Q9HCP0 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
CSNK1G1Q9HCP0 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC27.77■■■□□ 2.04
CSNK1G1Q9HCP0 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
CSNK1G1Q9HCP0 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC27.77■■■□□ 2.04
CSNK1G1Q9HCP0 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.04
CSNK1G1Q9HCP0 CIB2-204ENST00000557846 934 ntTSL 3 BASIC27.76■■■□□ 2.03
CSNK1G1Q9HCP0 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
CSNK1G1Q9HCP0 ST7-205ENST00000393446 2114 ntTSL 5 BASIC27.75■■■□□ 2.03
CSNK1G1Q9HCP0 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
CSNK1G1Q9HCP0 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC27.74■■■□□ 2.03
CSNK1G1Q9HCP0 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC27.74■■■□□ 2.03
CSNK1G1Q9HCP0 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC27.74■■■□□ 2.03
CSNK1G1Q9HCP0 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC27.73■■■□□ 2.03
CSNK1G1Q9HCP0 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC27.73■■■□□ 2.03
CSNK1G1Q9HCP0 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC27.73■■■□□ 2.03
CSNK1G1Q9HCP0 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC27.72■■■□□ 2.03
CSNK1G1Q9HCP0 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC27.72■■■□□ 2.03
CSNK1G1Q9HCP0 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
CSNK1G1Q9HCP0 ABHD17AP4-201ENST00000411545 909 ntBASIC27.71■■■□□ 2.03
CSNK1G1Q9HCP0 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC27.71■■■□□ 2.03
CSNK1G1Q9HCP0 DUX4L29-201ENST00000425409 679 ntBASIC27.71■■■□□ 2.03
CSNK1G1Q9HCP0 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC27.71■■■□□ 2.03
CSNK1G1Q9HCP0 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
CSNK1G1Q9HCP0 HGH1-207ENST00000628266 258 ntTSL 5 BASIC27.7■■■□□ 2.02
CSNK1G1Q9HCP0 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
CSNK1G1Q9HCP0 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC27.69■■■□□ 2.02
CSNK1G1Q9HCP0 AC021231.2-201ENST00000594613 730 ntBASIC27.69■■■□□ 2.02
CSNK1G1Q9HCP0 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
CSNK1G1Q9HCP0 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC27.67■■■□□ 2.02
CSNK1G1Q9HCP0 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
CSNK1G1Q9HCP0 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC27.66■■■□□ 2.02
CSNK1G1Q9HCP0 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
CSNK1G1Q9HCP0 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
CSNK1G1Q9HCP0 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
CSNK1G1Q9HCP0 ST7-202ENST00000323984 2142 ntTSL 5 BASIC27.64■■■□□ 2.01
CSNK1G1Q9HCP0 ST7-207ENST00000393449 2127 ntTSL 5 BASIC27.64■■■□□ 2.01
CSNK1G1Q9HCP0 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
CSNK1G1Q9HCP0 ST7-AS1-201ENST00000456775 1889 ntBASIC27.62■■■□□ 2.01
CSNK1G1Q9HCP0 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
CSNK1G1Q9HCP0 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC27.62■■■□□ 2.01
CSNK1G1Q9HCP0 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
CSNK1G1Q9HCP0 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
CSNK1G1Q9HCP0 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC27.61■■■□□ 2.01
CSNK1G1Q9HCP0 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
CSNK1G1Q9HCP0 EI24-212ENST00000615917 1407 ntTSL 2 BASIC27.6■■■□□ 2.01
CSNK1G1Q9HCP0 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC27.6■■■□□ 2.01
CSNK1G1Q9HCP0 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC27.6■■■□□ 2.01
CSNK1G1Q9HCP0 ZNRF2P2-203ENST00000454624 420 ntBASIC27.59■■■□□ 2.01
CSNK1G1Q9HCP0 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC27.59■■■□□ 2.01
CSNK1G1Q9HCP0 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC27.59■■■□□ 2.01
CSNK1G1Q9HCP0 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC27.59■■■□□ 2.01
CSNK1G1Q9HCP0 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC27.59■■■□□ 2.01
CSNK1G1Q9HCP0 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC27.57■■■□□ 2
CSNK1G1Q9HCP0 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC27.57■■■□□ 2
CSNK1G1Q9HCP0 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
CSNK1G1Q9HCP0 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
CSNK1G1Q9HCP0 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC27.57■■■□□ 2
CSNK1G1Q9HCP0 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
CSNK1G1Q9HCP0 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
CSNK1G1Q9HCP0 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC27.55■■■□□ 2
CSNK1G1Q9HCP0 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC27.55■■■□□ 2
CSNK1G1Q9HCP0 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC27.55■■■□□ 2
CSNK1G1Q9HCP0 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
CSNK1G1Q9HCP0 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC27.54■■■□□ 2
CSNK1G1Q9HCP0 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC27.54■■■□□ 2
CSNK1G1Q9HCP0 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
CSNK1G1Q9HCP0 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC27.53■■■□□ 2
CSNK1G1Q9HCP0 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC27.53■■■□□ 2
CSNK1G1Q9HCP0 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC27.53■■■□□ 2
CSNK1G1Q9HCP0 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC27.53■■■□□ 2
CSNK1G1Q9HCP0 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC27.53■■■□□ 2
CSNK1G1Q9HCP0 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
CSNK1G1Q9HCP0 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC27.52■■■□□ 2
CSNK1G1Q9HCP0 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC27.52■■■□□ 2
CSNK1G1Q9HCP0 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC27.52■■■□□ 2
CSNK1G1Q9HCP0 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
CSNK1G1Q9HCP0 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
CSNK1G1Q9HCP0 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC27.5■■□□□ 1.99
CSNK1G1Q9HCP0 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
CSNK1G1Q9HCP0 AC127502.1-201ENST00000399971 1502 ntBASIC27.5■■□□□ 1.99
CSNK1G1Q9HCP0 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
CSNK1G1Q9HCP0 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC27.49■■□□□ 1.99
CSNK1G1Q9HCP0 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC27.49■■□□□ 1.99
CSNK1G1Q9HCP0 MIR7108-201ENST00000614319 87 ntBASIC27.49■■□□□ 1.99
CSNK1G1Q9HCP0 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC27.49■■□□□ 1.99
CSNK1G1Q9HCP0 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
CSNK1G1Q9HCP0 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
CSNK1G1Q9HCP0 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC27.47■■□□□ 1.99
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms