Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
LRTM1Q9HBL6 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
LRTM1Q9HBL6 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
LRTM1Q9HBL6 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
LRTM1Q9HBL6 AL139393.2-201ENST00000608721 2025 ntBASIC25.19■■□□□ 1.62
LRTM1Q9HBL6 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC25.19■■□□□ 1.62
LRTM1Q9HBL6 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
LRTM1Q9HBL6 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
LRTM1Q9HBL6 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
LRTM1Q9HBL6 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC25.18■■□□□ 1.62
LRTM1Q9HBL6 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
LRTM1Q9HBL6 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
LRTM1Q9HBL6 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
LRTM1Q9HBL6 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC25.17■■□□□ 1.62
LRTM1Q9HBL6 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
LRTM1Q9HBL6 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
LRTM1Q9HBL6 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC25.16■■□□□ 1.62
LRTM1Q9HBL6 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC25.16■■□□□ 1.62
LRTM1Q9HBL6 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
LRTM1Q9HBL6 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
LRTM1Q9HBL6 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
LRTM1Q9HBL6 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
LRTM1Q9HBL6 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC25.14■■□□□ 1.62
LRTM1Q9HBL6 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
LRTM1Q9HBL6 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
LRTM1Q9HBL6 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
LRTM1Q9HBL6 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
LRTM1Q9HBL6 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
LRTM1Q9HBL6 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
LRTM1Q9HBL6 AL391121.1-201ENST00000607967 1349 ntBASIC25.11■■□□□ 1.61
LRTM1Q9HBL6 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
LRTM1Q9HBL6 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
LRTM1Q9HBL6 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
LRTM1Q9HBL6 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
LRTM1Q9HBL6 EBPL-202ENST00000378268 680 ntTSL 3 BASIC25.09■■□□□ 1.61
LRTM1Q9HBL6 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
LRTM1Q9HBL6 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC25.08■■□□□ 1.6
LRTM1Q9HBL6 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
LRTM1Q9HBL6 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
LRTM1Q9HBL6 DENR-202ENST00000455982 1052 ntTSL 5 BASIC25.07■■□□□ 1.6
LRTM1Q9HBL6 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
LRTM1Q9HBL6 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC25.07■■□□□ 1.6
LRTM1Q9HBL6 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC25.07■■□□□ 1.6
LRTM1Q9HBL6 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
LRTM1Q9HBL6 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC25.06■■□□□ 1.6
LRTM1Q9HBL6 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
LRTM1Q9HBL6 AC142086.6-201ENST00000621154 1765 ntBASIC25.05■■□□□ 1.6
LRTM1Q9HBL6 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC25.05■■□□□ 1.6
LRTM1Q9HBL6 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC25.05■■□□□ 1.6
LRTM1Q9HBL6 CAHM-201ENST00000604200 896 ntBASIC25.05■■□□□ 1.6
LRTM1Q9HBL6 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
LRTM1Q9HBL6 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC25.04■■□□□ 1.6
LRTM1Q9HBL6 AC136428.2-201ENST00000563187 214 ntBASIC25.04■■□□□ 1.6
LRTM1Q9HBL6 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
LRTM1Q9HBL6 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
LRTM1Q9HBL6 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC25.03■■□□□ 1.6
LRTM1Q9HBL6 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
LRTM1Q9HBL6 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC25.03■■□□□ 1.6
LRTM1Q9HBL6 AC097358.2-201ENST00000607541 1159 ntBASIC25.03■■□□□ 1.6
LRTM1Q9HBL6 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
LRTM1Q9HBL6 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
LRTM1Q9HBL6 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
LRTM1Q9HBL6 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC25.02■■□□□ 1.6
LRTM1Q9HBL6 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC25.02■■□□□ 1.6
LRTM1Q9HBL6 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
LRTM1Q9HBL6 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
LRTM1Q9HBL6 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
LRTM1Q9HBL6 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
LRTM1Q9HBL6 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
LRTM1Q9HBL6 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
LRTM1Q9HBL6 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
LRTM1Q9HBL6 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
LRTM1Q9HBL6 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
LRTM1Q9HBL6 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
LRTM1Q9HBL6 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
LRTM1Q9HBL6 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC24.97■■□□□ 1.59
LRTM1Q9HBL6 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC24.97■■□□□ 1.59
LRTM1Q9HBL6 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
LRTM1Q9HBL6 DRD5P2-201ENST00000421395 2012 ntBASIC24.96■■□□□ 1.59
LRTM1Q9HBL6 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC24.96■■□□□ 1.59
LRTM1Q9HBL6 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC24.96■■□□□ 1.59
LRTM1Q9HBL6 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
LRTM1Q9HBL6 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC24.95■■□□□ 1.58
LRTM1Q9HBL6 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC24.95■■□□□ 1.58
LRTM1Q9HBL6 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
LRTM1Q9HBL6 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC24.94■■□□□ 1.58
LRTM1Q9HBL6 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
LRTM1Q9HBL6 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
LRTM1Q9HBL6 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
LRTM1Q9HBL6 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC24.92■■□□□ 1.58
LRTM1Q9HBL6 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC24.91■■□□□ 1.58
LRTM1Q9HBL6 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC24.91■■□□□ 1.58
LRTM1Q9HBL6 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC24.91■■□□□ 1.58
LRTM1Q9HBL6 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
LRTM1Q9HBL6 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC24.9■■□□□ 1.58
LRTM1Q9HBL6 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
LRTM1Q9HBL6 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC24.9■■□□□ 1.58
LRTM1Q9HBL6 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC24.9■■□□□ 1.58
LRTM1Q9HBL6 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC24.89■■□□□ 1.58
LRTM1Q9HBL6 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC24.89■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms