Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
ATP6V0A4Q9HBG4 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
ATP6V0A4Q9HBG4 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
ATP6V0A4Q9HBG4 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
ATP6V0A4Q9HBG4 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
ATP6V0A4Q9HBG4 AC108673.1-201ENST00000510422 1159 ntBASIC29.34■■■□□ 2.29
ATP6V0A4Q9HBG4 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC29.34■■■□□ 2.29
ATP6V0A4Q9HBG4 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
ATP6V0A4Q9HBG4 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC29.33■■■□□ 2.29
ATP6V0A4Q9HBG4 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC29.33■■■□□ 2.29
ATP6V0A4Q9HBG4 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC29.33■■■□□ 2.29
ATP6V0A4Q9HBG4 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC29.32■■■□□ 2.28
ATP6V0A4Q9HBG4 HGH1-207ENST00000628266 258 ntTSL 5 BASIC29.32■■■□□ 2.28
ATP6V0A4Q9HBG4 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
ATP6V0A4Q9HBG4 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC29.3■■■□□ 2.28
ATP6V0A4Q9HBG4 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC29.3■■■□□ 2.28
ATP6V0A4Q9HBG4 MIR6090-201ENST00000622481 60 ntBASIC29.3■■■□□ 2.28
ATP6V0A4Q9HBG4 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
ATP6V0A4Q9HBG4 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
ATP6V0A4Q9HBG4 HLA-V-202ENST00000446817 847 ntBASIC29.29■■■□□ 2.28
ATP6V0A4Q9HBG4 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC29.28■■■□□ 2.28
ATP6V0A4Q9HBG4 DUX4L29-201ENST00000425409 679 ntBASIC29.28■■■□□ 2.28
ATP6V0A4Q9HBG4 MBP-237ENST00000579129 1052 ntTSL 5 BASIC29.28■■■□□ 2.28
ATP6V0A4Q9HBG4 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC29.28■■■□□ 2.28
ATP6V0A4Q9HBG4 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC29.27■■■□□ 2.28
ATP6V0A4Q9HBG4 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
ATP6V0A4Q9HBG4 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC29.27■■■□□ 2.28
ATP6V0A4Q9HBG4 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC29.26■■■□□ 2.28
ATP6V0A4Q9HBG4 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC29.26■■■□□ 2.27
ATP6V0A4Q9HBG4 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
ATP6V0A4Q9HBG4 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC29.25■■■□□ 2.27
ATP6V0A4Q9HBG4 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
ATP6V0A4Q9HBG4 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC29.25■■■□□ 2.27
ATP6V0A4Q9HBG4 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC29.25■■■□□ 2.27
ATP6V0A4Q9HBG4 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC29.24■■■□□ 2.27
ATP6V0A4Q9HBG4 AC010864.1-201ENST00000609407 1511 ntBASIC29.24■■■□□ 2.27
ATP6V0A4Q9HBG4 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
ATP6V0A4Q9HBG4 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC29.23■■■□□ 2.27
ATP6V0A4Q9HBG4 CIB2-204ENST00000557846 934 ntTSL 3 BASIC29.23■■■□□ 2.27
ATP6V0A4Q9HBG4 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
ATP6V0A4Q9HBG4 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
ATP6V0A4Q9HBG4 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
ATP6V0A4Q9HBG4 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
ATP6V0A4Q9HBG4 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
ATP6V0A4Q9HBG4 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
ATP6V0A4Q9HBG4 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
ATP6V0A4Q9HBG4 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC29.2■■■□□ 2.26
ATP6V0A4Q9HBG4 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC29.2■■■□□ 2.26
ATP6V0A4Q9HBG4 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC29.19■■■□□ 2.26
ATP6V0A4Q9HBG4 AL135925.1-201ENST00000605920 1701 ntBASIC29.19■■■□□ 2.26
ATP6V0A4Q9HBG4 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC29.18■■■□□ 2.26
ATP6V0A4Q9HBG4 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
ATP6V0A4Q9HBG4 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC29.18■■■□□ 2.26
ATP6V0A4Q9HBG4 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
ATP6V0A4Q9HBG4 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
ATP6V0A4Q9HBG4 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
ATP6V0A4Q9HBG4 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC29.16■■■□□ 2.26
ATP6V0A4Q9HBG4 AC021231.2-201ENST00000594613 730 ntBASIC29.16■■■□□ 2.26
ATP6V0A4Q9HBG4 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
ATP6V0A4Q9HBG4 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
ATP6V0A4Q9HBG4 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC29.14■■■□□ 2.26
ATP6V0A4Q9HBG4 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC29.12■■■□□ 2.25
ATP6V0A4Q9HBG4 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
ATP6V0A4Q9HBG4 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC29.12■■■□□ 2.25
ATP6V0A4Q9HBG4 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC29.12■■■□□ 2.25
ATP6V0A4Q9HBG4 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC29.12■■■□□ 2.25
ATP6V0A4Q9HBG4 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC29.11■■■□□ 2.25
ATP6V0A4Q9HBG4 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC29.11■■■□□ 2.25
ATP6V0A4Q9HBG4 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
ATP6V0A4Q9HBG4 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC29.1■■■□□ 2.25
ATP6V0A4Q9HBG4 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC29.1■■■□□ 2.25
ATP6V0A4Q9HBG4 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC29.09■■■□□ 2.25
ATP6V0A4Q9HBG4 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
ATP6V0A4Q9HBG4 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC29.08■■■□□ 2.25
ATP6V0A4Q9HBG4 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC29.08■■■□□ 2.25
ATP6V0A4Q9HBG4 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
ATP6V0A4Q9HBG4 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
ATP6V0A4Q9HBG4 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC29.04■■■□□ 2.24
ATP6V0A4Q9HBG4 EI24-212ENST00000615917 1407 ntTSL 2 BASIC29.02■■■□□ 2.24
ATP6V0A4Q9HBG4 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC29■■■□□ 2.23
ATP6V0A4Q9HBG4 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
ATP6V0A4Q9HBG4 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC28.99■■■□□ 2.23
ATP6V0A4Q9HBG4 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
ATP6V0A4Q9HBG4 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
ATP6V0A4Q9HBG4 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
ATP6V0A4Q9HBG4 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
ATP6V0A4Q9HBG4 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC28.97■■■□□ 2.23
ATP6V0A4Q9HBG4 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC28.97■■■□□ 2.23
ATP6V0A4Q9HBG4 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
ATP6V0A4Q9HBG4 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC28.97■■■□□ 2.23
ATP6V0A4Q9HBG4 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC28.97■■■□□ 2.23
ATP6V0A4Q9HBG4 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC28.97■■■□□ 2.23
ATP6V0A4Q9HBG4 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC28.97■■■□□ 2.23
ATP6V0A4Q9HBG4 ST7-AS1-201ENST00000456775 1889 ntBASIC28.97■■■□□ 2.23
ATP6V0A4Q9HBG4 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC28.96■■■□□ 2.23
ATP6V0A4Q9HBG4 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
ATP6V0A4Q9HBG4 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC28.95■■■□□ 2.23
ATP6V0A4Q9HBG4 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC28.95■■■□□ 2.22
ATP6V0A4Q9HBG4 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC28.95■■■□□ 2.22
ATP6V0A4Q9HBG4 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC28.95■■■□□ 2.22
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms