Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
CDK5RAP1Q96SZ6 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC27.46■■□□□ 1.99
CDK5RAP1Q96SZ6 HGH1-207ENST00000628266 258 ntTSL 5 BASIC27.46■■□□□ 1.99
CDK5RAP1Q96SZ6 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
CDK5RAP1Q96SZ6 AC010864.1-201ENST00000609407 1511 ntBASIC27.45■■□□□ 1.98
CDK5RAP1Q96SZ6 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC27.44■■□□□ 1.98
CDK5RAP1Q96SZ6 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
CDK5RAP1Q96SZ6 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC27.43■■□□□ 1.98
CDK5RAP1Q96SZ6 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
CDK5RAP1Q96SZ6 AC021231.2-201ENST00000594613 730 ntBASIC27.43■■□□□ 1.98
CDK5RAP1Q96SZ6 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC27.43■■□□□ 1.98
CDK5RAP1Q96SZ6 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
CDK5RAP1Q96SZ6 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
CDK5RAP1Q96SZ6 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
CDK5RAP1Q96SZ6 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
CDK5RAP1Q96SZ6 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
CDK5RAP1Q96SZ6 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
CDK5RAP1Q96SZ6 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC27.39■■□□□ 1.98
CDK5RAP1Q96SZ6 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
CDK5RAP1Q96SZ6 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC27.39■■□□□ 1.98
CDK5RAP1Q96SZ6 ZNRF2P2-203ENST00000454624 420 ntBASIC27.39■■□□□ 1.98
CDK5RAP1Q96SZ6 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC27.38■■□□□ 1.97
CDK5RAP1Q96SZ6 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
CDK5RAP1Q96SZ6 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
CDK5RAP1Q96SZ6 EI24-212ENST00000615917 1407 ntTSL 2 BASIC27.38■■□□□ 1.97
CDK5RAP1Q96SZ6 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC27.37■■□□□ 1.97
CDK5RAP1Q96SZ6 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
CDK5RAP1Q96SZ6 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
CDK5RAP1Q96SZ6 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC27.36■■□□□ 1.97
CDK5RAP1Q96SZ6 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC27.36■■□□□ 1.97
CDK5RAP1Q96SZ6 AL135925.1-201ENST00000605920 1701 ntBASIC27.36■■□□□ 1.97
CDK5RAP1Q96SZ6 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC27.35■■□□□ 1.97
CDK5RAP1Q96SZ6 MIR7108-201ENST00000614319 87 ntBASIC27.35■■□□□ 1.97
CDK5RAP1Q96SZ6 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC27.35■■□□□ 1.97
CDK5RAP1Q96SZ6 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC27.35■■□□□ 1.97
CDK5RAP1Q96SZ6 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC27.35■■□□□ 1.97
CDK5RAP1Q96SZ6 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
CDK5RAP1Q96SZ6 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
CDK5RAP1Q96SZ6 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC27.33■■□□□ 1.97
CDK5RAP1Q96SZ6 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC27.32■■□□□ 1.96
CDK5RAP1Q96SZ6 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC27.32■■□□□ 1.96
CDK5RAP1Q96SZ6 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CDK5RAP1Q96SZ6 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
CDK5RAP1Q96SZ6 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CDK5RAP1Q96SZ6 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CDK5RAP1Q96SZ6 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC27.29■■□□□ 1.96
CDK5RAP1Q96SZ6 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC27.29■■□□□ 1.96
CDK5RAP1Q96SZ6 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC27.29■■□□□ 1.96
CDK5RAP1Q96SZ6 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CDK5RAP1Q96SZ6 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC27.29■■□□□ 1.96
CDK5RAP1Q96SZ6 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
CDK5RAP1Q96SZ6 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC27.28■■□□□ 1.96
CDK5RAP1Q96SZ6 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CDK5RAP1Q96SZ6 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC27.28■■□□□ 1.96
CDK5RAP1Q96SZ6 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC27.28■■□□□ 1.96
CDK5RAP1Q96SZ6 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC27.28■■□□□ 1.96
CDK5RAP1Q96SZ6 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CDK5RAP1Q96SZ6 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC27.27■■□□□ 1.96
CDK5RAP1Q96SZ6 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CDK5RAP1Q96SZ6 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC27.27■■□□□ 1.96
CDK5RAP1Q96SZ6 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CDK5RAP1Q96SZ6 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC27.24■■□□□ 1.95
CDK5RAP1Q96SZ6 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC27.24■■□□□ 1.95
CDK5RAP1Q96SZ6 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
CDK5RAP1Q96SZ6 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
CDK5RAP1Q96SZ6 LINC01971-201ENST00000617888 1048 ntBASIC27.22■■□□□ 1.95
CDK5RAP1Q96SZ6 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
CDK5RAP1Q96SZ6 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
CDK5RAP1Q96SZ6 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
CDK5RAP1Q96SZ6 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
CDK5RAP1Q96SZ6 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC27.2■■□□□ 1.94
CDK5RAP1Q96SZ6 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC27.19■■□□□ 1.94
CDK5RAP1Q96SZ6 CALM3-209ENST00000597743 577 ntTSL 4 BASIC27.18■■□□□ 1.94
CDK5RAP1Q96SZ6 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC27.17■■□□□ 1.94
CDK5RAP1Q96SZ6 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
CDK5RAP1Q96SZ6 PVT1-219ENST00000523427 938 ntTSL 3 BASIC27.17■■□□□ 1.94
CDK5RAP1Q96SZ6 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC27.17■■□□□ 1.94
CDK5RAP1Q96SZ6 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
CDK5RAP1Q96SZ6 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
CDK5RAP1Q96SZ6 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC27.15■■□□□ 1.94
CDK5RAP1Q96SZ6 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
CDK5RAP1Q96SZ6 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
CDK5RAP1Q96SZ6 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC27.14■■□□□ 1.94
CDK5RAP1Q96SZ6 LINC00273-201ENST00000539813 1452 ntBASIC27.14■■□□□ 1.94
CDK5RAP1Q96SZ6 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC27.13■■□□□ 1.93
CDK5RAP1Q96SZ6 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC27.13■■□□□ 1.93
CDK5RAP1Q96SZ6 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC27.13■■□□□ 1.93
CDK5RAP1Q96SZ6 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC27.13■■□□□ 1.93
CDK5RAP1Q96SZ6 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC27.13■■□□□ 1.93
CDK5RAP1Q96SZ6 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
CDK5RAP1Q96SZ6 AC127502.1-201ENST00000399971 1502 ntBASIC27.11■■□□□ 1.93
CDK5RAP1Q96SZ6 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC27.11■■□□□ 1.93
CDK5RAP1Q96SZ6 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC27.11■■□□□ 1.93
CDK5RAP1Q96SZ6 AGPS-202ENST00000409888 815 ntTSL 4 BASIC27.11■■□□□ 1.93
CDK5RAP1Q96SZ6 MACF1-219ENST00000484793 834 ntTSL 2 BASIC27.11■■□□□ 1.93
CDK5RAP1Q96SZ6 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC27.11■■□□□ 1.93
CDK5RAP1Q96SZ6 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC27.11■■□□□ 1.93
CDK5RAP1Q96SZ6 DUX4L11-201ENST00000611504 1267 ntBASIC27.11■■□□□ 1.93
CDK5RAP1Q96SZ6 DUX4L12-201ENST00000614593 1267 ntBASIC27.11■■□□□ 1.93
CDK5RAP1Q96SZ6 DUX4L14-201ENST00000621227 1267 ntBASIC27.11■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms