Protein–RNA interactions for Protein: Q96MP5

ZSWIM3, Zinc finger SWIM domain-containing protein 3, humanhuman

Predictions only

Length 696 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM3Q96MP5 AGPS-202ENST00000409888 815 ntTSL 4 BASIC27.57■■■□□ 2
ZSWIM3Q96MP5 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
ZSWIM3Q96MP5 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC27.56■■■□□ 2
ZSWIM3Q96MP5 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
ZSWIM3Q96MP5 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC27.56■■■□□ 2
ZSWIM3Q96MP5 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
ZSWIM3Q96MP5 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC27.55■■■□□ 2
ZSWIM3Q96MP5 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC27.54■■■□□ 2
ZSWIM3Q96MP5 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
ZSWIM3Q96MP5 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
ZSWIM3Q96MP5 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
ZSWIM3Q96MP5 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC27.53■■■□□ 2
ZSWIM3Q96MP5 CALM3-209ENST00000597743 577 ntTSL 4 BASIC27.53■■■□□ 2
ZSWIM3Q96MP5 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
ZSWIM3Q96MP5 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC27.52■■■□□ 2
ZSWIM3Q96MP5 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC27.52■■■□□ 2
ZSWIM3Q96MP5 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC27.52■■■□□ 2
ZSWIM3Q96MP5 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC27.52■■■□□ 2
ZSWIM3Q96MP5 AL161658.1-201ENST00000623641 1967 ntBASIC27.51■■■□□ 2
ZSWIM3Q96MP5 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
ZSWIM3Q96MP5 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC27.51■■□□□ 1.99
ZSWIM3Q96MP5 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
ZSWIM3Q96MP5 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
ZSWIM3Q96MP5 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
ZSWIM3Q96MP5 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC27.49■■□□□ 1.99
ZSWIM3Q96MP5 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC27.49■■□□□ 1.99
ZSWIM3Q96MP5 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC27.48■■□□□ 1.99
ZSWIM3Q96MP5 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC27.48■■□□□ 1.99
ZSWIM3Q96MP5 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC27.48■■□□□ 1.99
ZSWIM3Q96MP5 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC27.48■■□□□ 1.99
ZSWIM3Q96MP5 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
ZSWIM3Q96MP5 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
ZSWIM3Q96MP5 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
ZSWIM3Q96MP5 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
ZSWIM3Q96MP5 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC27.47■■□□□ 1.99
ZSWIM3Q96MP5 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
ZSWIM3Q96MP5 EI24-212ENST00000615917 1407 ntTSL 2 BASIC27.46■■□□□ 1.99
ZSWIM3Q96MP5 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
ZSWIM3Q96MP5 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
ZSWIM3Q96MP5 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC27.44■■□□□ 1.98
ZSWIM3Q96MP5 DUX4L13-201ENST00000554103 1267 ntBASIC27.44■■□□□ 1.98
ZSWIM3Q96MP5 DUX4L15-201ENST00000611059 1267 ntBASIC27.44■■□□□ 1.98
ZSWIM3Q96MP5 DUX4L23-201ENST00000615195 1269 ntBASIC27.44■■□□□ 1.98
ZSWIM3Q96MP5 DUX4L24-201ENST00000617576 1269 ntBASIC27.44■■□□□ 1.98
ZSWIM3Q96MP5 DUX4L22-201ENST00000618238 1269 ntBASIC27.44■■□□□ 1.98
ZSWIM3Q96MP5 DUX4L20-201ENST00000619712 1269 ntBASIC27.44■■□□□ 1.98
ZSWIM3Q96MP5 DUX4L21-201ENST00000622058 1269 ntBASIC27.44■■□□□ 1.98
ZSWIM3Q96MP5 DUX4L10-201ENST00000622460 1267 ntBASIC27.44■■□□□ 1.98
ZSWIM3Q96MP5 DUX4L25-201ENST00000624915 1269 ntBASIC27.44■■□□□ 1.98
ZSWIM3Q96MP5 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
ZSWIM3Q96MP5 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC27.43■■□□□ 1.98
ZSWIM3Q96MP5 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
ZSWIM3Q96MP5 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
ZSWIM3Q96MP5 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
ZSWIM3Q96MP5 HSD17B1P1-201ENST00000590052 955 ntBASIC27.41■■□□□ 1.98
ZSWIM3Q96MP5 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
ZSWIM3Q96MP5 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC27.39■■□□□ 1.98
ZSWIM3Q96MP5 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC27.39■■□□□ 1.98
ZSWIM3Q96MP5 METRNL-202ENST00000570778 967 ntTSL 5 BASIC27.39■■□□□ 1.98
ZSWIM3Q96MP5 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC27.38■■□□□ 1.97
ZSWIM3Q96MP5 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC27.37■■□□□ 1.97
ZSWIM3Q96MP5 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
ZSWIM3Q96MP5 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
ZSWIM3Q96MP5 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC27.36■■□□□ 1.97
ZSWIM3Q96MP5 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC27.36■■□□□ 1.97
ZSWIM3Q96MP5 HES6-205ENST00000409356 528 ntTSL 2 BASIC27.36■■□□□ 1.97
ZSWIM3Q96MP5 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
ZSWIM3Q96MP5 CHML-204ENST00000638121 920 ntTSL 2 BASIC27.36■■□□□ 1.97
ZSWIM3Q96MP5 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC27.35■■□□□ 1.97
ZSWIM3Q96MP5 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
ZSWIM3Q96MP5 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
ZSWIM3Q96MP5 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
ZSWIM3Q96MP5 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
ZSWIM3Q96MP5 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC27.33■■□□□ 1.96
ZSWIM3Q96MP5 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
ZSWIM3Q96MP5 ABHD17AP3-201ENST00000503096 1137 ntBASIC27.32■■□□□ 1.96
ZSWIM3Q96MP5 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC27.31■■□□□ 1.96
ZSWIM3Q96MP5 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC27.3■■□□□ 1.96
ZSWIM3Q96MP5 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC27.3■■□□□ 1.96
ZSWIM3Q96MP5 BRD4-212ENST00000630599 726 ntTSL 2 BASIC27.29■■□□□ 1.96
ZSWIM3Q96MP5 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC27.29■■□□□ 1.96
ZSWIM3Q96MP5 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC27.29■■□□□ 1.96
ZSWIM3Q96MP5 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
ZSWIM3Q96MP5 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC27.28■■□□□ 1.96
ZSWIM3Q96MP5 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC27.27■■□□□ 1.96
ZSWIM3Q96MP5 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
ZSWIM3Q96MP5 AC010864.1-201ENST00000609407 1511 ntBASIC27.26■■□□□ 1.96
ZSWIM3Q96MP5 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC27.26■■□□□ 1.95
ZSWIM3Q96MP5 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC27.25■■□□□ 1.95
ZSWIM3Q96MP5 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
ZSWIM3Q96MP5 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
ZSWIM3Q96MP5 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC27.24■■□□□ 1.95
ZSWIM3Q96MP5 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC27.24■■□□□ 1.95
ZSWIM3Q96MP5 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
ZSWIM3Q96MP5 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC27.23■■□□□ 1.95
ZSWIM3Q96MP5 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
ZSWIM3Q96MP5 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC27.21■■□□□ 1.95
ZSWIM3Q96MP5 LINC00273-201ENST00000539813 1452 ntBASIC27.21■■□□□ 1.95
ZSWIM3Q96MP5 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
ZSWIM3Q96MP5 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC27.21■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 126.6 ms