Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 MIR6090-201ENST00000622481 60 ntBASIC19.28■□□□□ 0.68
RNF183Q96D59 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF183Q96D59 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF183Q96D59 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF183Q96D59 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF183Q96D59 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF183Q96D59 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RNF183Q96D59 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF183Q96D59 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF183Q96D59 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF183Q96D59 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RNF183Q96D59 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC19.25■□□□□ 0.67
RNF183Q96D59 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
RNF183Q96D59 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF183Q96D59 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF183Q96D59 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF183Q96D59 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF183Q96D59 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC19.24■□□□□ 0.67
RNF183Q96D59 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC19.24■□□□□ 0.67
RNF183Q96D59 AC021231.2-201ENST00000594613 730 ntBASIC19.24■□□□□ 0.67
RNF183Q96D59 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
RNF183Q96D59 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF183Q96D59 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF183Q96D59 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
RNF183Q96D59 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF183Q96D59 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RNF183Q96D59 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RNF183Q96D59 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RNF183Q96D59 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC19.21■□□□□ 0.67
RNF183Q96D59 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF183Q96D59 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RNF183Q96D59 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF183Q96D59 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC19.21■□□□□ 0.67
RNF183Q96D59 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC19.21■□□□□ 0.67
RNF183Q96D59 PVT1-219ENST00000523427 938 ntTSL 3 BASIC19.21■□□□□ 0.67
RNF183Q96D59 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC19.21■□□□□ 0.67
RNF183Q96D59 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF183Q96D59 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RNF183Q96D59 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF183Q96D59 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
RNF183Q96D59 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF183Q96D59 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC19.19■□□□□ 0.66
RNF183Q96D59 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF183Q96D59 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF183Q96D59 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF183Q96D59 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
RNF183Q96D59 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
RNF183Q96D59 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF183Q96D59 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF183Q96D59 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RNF183Q96D59 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RNF183Q96D59 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF183Q96D59 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF183Q96D59 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RNF183Q96D59 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF183Q96D59 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF183Q96D59 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF183Q96D59 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RNF183Q96D59 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF183Q96D59 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF183Q96D59 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC19.15■□□□□ 0.66
RNF183Q96D59 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RNF183Q96D59 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RNF183Q96D59 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF183Q96D59 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
RNF183Q96D59 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RNF183Q96D59 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF183Q96D59 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF183Q96D59 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RNF183Q96D59 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF183Q96D59 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
RNF183Q96D59 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF183Q96D59 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
RNF183Q96D59 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC19.11■□□□□ 0.65
RNF183Q96D59 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC19.11■□□□□ 0.65
RNF183Q96D59 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RNF183Q96D59 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF183Q96D59 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF183Q96D59 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC19.1■□□□□ 0.65
RNF183Q96D59 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
RNF183Q96D59 EI24-212ENST00000615917 1407 ntTSL 2 BASIC19.09■□□□□ 0.65
RNF183Q96D59 HLA-V-202ENST00000446817 847 ntBASIC19.09■□□□□ 0.65
RNF183Q96D59 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
RNF183Q96D59 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF183Q96D59 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RNF183Q96D59 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC19.08■□□□□ 0.65
RNF183Q96D59 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
RNF183Q96D59 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC19.07■□□□□ 0.64
RNF183Q96D59 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC19.07■□□□□ 0.64
RNF183Q96D59 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
RNF183Q96D59 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC19.06■□□□□ 0.64
RNF183Q96D59 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF183Q96D59 MBP-237ENST00000579129 1052 ntTSL 5 BASIC19.06■□□□□ 0.64
RNF183Q96D59 LINC01971-201ENST00000617888 1048 ntBASIC19.06■□□□□ 0.64
RNF183Q96D59 AC010864.1-201ENST00000609407 1511 ntBASIC19.05■□□□□ 0.64
RNF183Q96D59 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC19.05■□□□□ 0.64
RNF183Q96D59 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
RNF183Q96D59 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RNF183Q96D59 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF183Q96D59 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 12.3 ms