Protein–RNA interactions for Protein: Q8NCS7

SLC44A5, Choline transporter-like protein 5, humanhuman

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A5Q8NCS7 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
SLC44A5Q8NCS7 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC31.31■■■□□ 2.6
SLC44A5Q8NCS7 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC31.3■■■□□ 2.6
SLC44A5Q8NCS7 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
SLC44A5Q8NCS7 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
SLC44A5Q8NCS7 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
SLC44A5Q8NCS7 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
SLC44A5Q8NCS7 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC31.27■■■□□ 2.6
SLC44A5Q8NCS7 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
SLC44A5Q8NCS7 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
SLC44A5Q8NCS7 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC31.27■■■□□ 2.6
SLC44A5Q8NCS7 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
SLC44A5Q8NCS7 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC31.24■■■□□ 2.59
SLC44A5Q8NCS7 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC31.23■■■□□ 2.59
SLC44A5Q8NCS7 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC31.23■■■□□ 2.59
SLC44A5Q8NCS7 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC31.23■■■□□ 2.59
SLC44A5Q8NCS7 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
SLC44A5Q8NCS7 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC31.22■■■□□ 2.59
SLC44A5Q8NCS7 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC31.22■■■□□ 2.59
SLC44A5Q8NCS7 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC31.21■■■□□ 2.59
SLC44A5Q8NCS7 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
SLC44A5Q8NCS7 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
SLC44A5Q8NCS7 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
SLC44A5Q8NCS7 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC31.2■■■□□ 2.58
SLC44A5Q8NCS7 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC31.19■■■□□ 2.58
SLC44A5Q8NCS7 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
SLC44A5Q8NCS7 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC31.18■■■□□ 2.58
SLC44A5Q8NCS7 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
SLC44A5Q8NCS7 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
SLC44A5Q8NCS7 AC010864.1-201ENST00000609407 1511 ntBASIC31.17■■■□□ 2.58
SLC44A5Q8NCS7 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
SLC44A5Q8NCS7 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC31.14■■■□□ 2.58
SLC44A5Q8NCS7 MBP-237ENST00000579129 1052 ntTSL 5 BASIC31.14■■■□□ 2.58
SLC44A5Q8NCS7 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC31.13■■■□□ 2.57
SLC44A5Q8NCS7 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC31.13■■■□□ 2.57
SLC44A5Q8NCS7 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC31.13■■■□□ 2.57
SLC44A5Q8NCS7 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
SLC44A5Q8NCS7 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC31.12■■■□□ 2.57
SLC44A5Q8NCS7 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
SLC44A5Q8NCS7 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
SLC44A5Q8NCS7 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC31.1■■■□□ 2.57
SLC44A5Q8NCS7 HLA-V-202ENST00000446817 847 ntBASIC31.09■■■□□ 2.57
SLC44A5Q8NCS7 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC31.08■■■□□ 2.57
SLC44A5Q8NCS7 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC31.08■■■□□ 2.57
SLC44A5Q8NCS7 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
SLC44A5Q8NCS7 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC31.07■■■□□ 2.56
SLC44A5Q8NCS7 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC31.06■■■□□ 2.56
SLC44A5Q8NCS7 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC31.05■■■□□ 2.56
SLC44A5Q8NCS7 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
SLC44A5Q8NCS7 RPS2-202ENST00000526522 924 ntTSL 2 BASIC31.03■■■□□ 2.56
SLC44A5Q8NCS7 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
SLC44A5Q8NCS7 EI24-212ENST00000615917 1407 ntTSL 2 BASIC31.02■■■□□ 2.56
SLC44A5Q8NCS7 RNF166-209ENST00000567844 633 ntTSL 5 BASIC31.01■■■□□ 2.55
SLC44A5Q8NCS7 LINC01971-201ENST00000617888 1048 ntBASIC31.01■■■□□ 2.55
SLC44A5Q8NCS7 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
SLC44A5Q8NCS7 AL135925.1-201ENST00000605920 1701 ntBASIC31■■■□□ 2.55
SLC44A5Q8NCS7 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC31■■■□□ 2.55
SLC44A5Q8NCS7 DUX4L11-201ENST00000611504 1267 ntBASIC30.99■■■□□ 2.55
SLC44A5Q8NCS7 DUX4L12-201ENST00000614593 1267 ntBASIC30.99■■■□□ 2.55
SLC44A5Q8NCS7 DUX4L14-201ENST00000621227 1267 ntBASIC30.99■■■□□ 2.55
SLC44A5Q8NCS7 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC30.97■■■□□ 2.55
SLC44A5Q8NCS7 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
SLC44A5Q8NCS7 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
SLC44A5Q8NCS7 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC30.97■■■□□ 2.55
SLC44A5Q8NCS7 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
SLC44A5Q8NCS7 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC30.96■■■□□ 2.55
SLC44A5Q8NCS7 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC30.96■■■□□ 2.55
SLC44A5Q8NCS7 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
SLC44A5Q8NCS7 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC30.95■■■□□ 2.54
SLC44A5Q8NCS7 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC30.95■■■□□ 2.54
SLC44A5Q8NCS7 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC30.94■■■□□ 2.54
SLC44A5Q8NCS7 MACF1-219ENST00000484793 834 ntTSL 2 BASIC30.94■■■□□ 2.54
SLC44A5Q8NCS7 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC30.94■■■□□ 2.54
SLC44A5Q8NCS7 CR559946.2-201ENST00000623684 991 ntBASIC30.93■■■□□ 2.54
SLC44A5Q8NCS7 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
SLC44A5Q8NCS7 MIR3648-2-201ENST00000581792 180 ntBASIC30.92■■■□□ 2.54
SLC44A5Q8NCS7 CALM3-209ENST00000597743 577 ntTSL 4 BASIC30.92■■■□□ 2.54
SLC44A5Q8NCS7 MIR3648-1-201ENST00000615959 180 ntBASIC30.92■■■□□ 2.54
SLC44A5Q8NCS7 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
SLC44A5Q8NCS7 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
SLC44A5Q8NCS7 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC30.91■■■□□ 2.54
SLC44A5Q8NCS7 AC016575.1-201ENST00000607026 382 ntBASIC30.91■■■□□ 2.54
SLC44A5Q8NCS7 GDI1-215ENST00000630693 786 ntTSL 4 BASIC30.91■■■□□ 2.54
SLC44A5Q8NCS7 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
SLC44A5Q8NCS7 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
SLC44A5Q8NCS7 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC30.91■■■□□ 2.54
SLC44A5Q8NCS7 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
SLC44A5Q8NCS7 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC30.9■■■□□ 2.54
SLC44A5Q8NCS7 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
SLC44A5Q8NCS7 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC30.89■■■□□ 2.54
SLC44A5Q8NCS7 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC30.89■■■□□ 2.54
SLC44A5Q8NCS7 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
SLC44A5Q8NCS7 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC30.88■■■□□ 2.53
SLC44A5Q8NCS7 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC30.87■■■□□ 2.53
SLC44A5Q8NCS7 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
SLC44A5Q8NCS7 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
SLC44A5Q8NCS7 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC30.86■■■□□ 2.53
SLC44A5Q8NCS7 AC127502.1-201ENST00000399971 1502 ntBASIC30.86■■■□□ 2.53
SLC44A5Q8NCS7 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC30.86■■■□□ 2.53
SLC44A5Q8NCS7 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms