Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC24.05■■□□□ 1.44
LSMEM1Q8N8F7 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
LSMEM1Q8N8F7 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
LSMEM1Q8N8F7 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
LSMEM1Q8N8F7 AC010864.1-201ENST00000609407 1511 ntBASIC24.04■■□□□ 1.44
LSMEM1Q8N8F7 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
LSMEM1Q8N8F7 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
LSMEM1Q8N8F7 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
LSMEM1Q8N8F7 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
LSMEM1Q8N8F7 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC24.02■■□□□ 1.44
LSMEM1Q8N8F7 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
LSMEM1Q8N8F7 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
LSMEM1Q8N8F7 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC24.01■■□□□ 1.43
LSMEM1Q8N8F7 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
LSMEM1Q8N8F7 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
LSMEM1Q8N8F7 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC24■■□□□ 1.43
LSMEM1Q8N8F7 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
LSMEM1Q8N8F7 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
LSMEM1Q8N8F7 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
LSMEM1Q8N8F7 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
LSMEM1Q8N8F7 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
LSMEM1Q8N8F7 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
LSMEM1Q8N8F7 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC23.97■■□□□ 1.43
LSMEM1Q8N8F7 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC23.97■■□□□ 1.43
LSMEM1Q8N8F7 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
LSMEM1Q8N8F7 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
LSMEM1Q8N8F7 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
LSMEM1Q8N8F7 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
LSMEM1Q8N8F7 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
LSMEM1Q8N8F7 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
LSMEM1Q8N8F7 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC23.95■■□□□ 1.42
LSMEM1Q8N8F7 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC23.95■■□□□ 1.42
LSMEM1Q8N8F7 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
LSMEM1Q8N8F7 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
LSMEM1Q8N8F7 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
LSMEM1Q8N8F7 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
LSMEM1Q8N8F7 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC23.93■■□□□ 1.42
LSMEM1Q8N8F7 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
LSMEM1Q8N8F7 SHF-206ENST00000560471 2499 ntTSL 5 BASIC23.92■■□□□ 1.42
LSMEM1Q8N8F7 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
LSMEM1Q8N8F7 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
LSMEM1Q8N8F7 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
LSMEM1Q8N8F7 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
LSMEM1Q8N8F7 AL139393.2-201ENST00000608721 2025 ntBASIC23.9■■□□□ 1.42
LSMEM1Q8N8F7 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC23.9■■□□□ 1.42
LSMEM1Q8N8F7 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
LSMEM1Q8N8F7 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
LSMEM1Q8N8F7 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
LSMEM1Q8N8F7 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
LSMEM1Q8N8F7 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC23.88■■□□□ 1.41
LSMEM1Q8N8F7 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
LSMEM1Q8N8F7 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC23.87■■□□□ 1.41
LSMEM1Q8N8F7 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
LSMEM1Q8N8F7 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
LSMEM1Q8N8F7 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
LSMEM1Q8N8F7 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
LSMEM1Q8N8F7 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC23.85■■□□□ 1.41
LSMEM1Q8N8F7 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
LSMEM1Q8N8F7 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC23.84■■□□□ 1.41
LSMEM1Q8N8F7 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
LSMEM1Q8N8F7 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC23.83■■□□□ 1.41
LSMEM1Q8N8F7 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
LSMEM1Q8N8F7 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.4
LSMEM1Q8N8F7 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
LSMEM1Q8N8F7 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
LSMEM1Q8N8F7 MIR762-201ENST00000390236 83 ntBASIC23.82■■□□□ 1.4
LSMEM1Q8N8F7 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
LSMEM1Q8N8F7 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC23.82■■□□□ 1.4
LSMEM1Q8N8F7 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC23.81■■□□□ 1.4
LSMEM1Q8N8F7 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC23.81■■□□□ 1.4
LSMEM1Q8N8F7 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC23.81■■□□□ 1.4
LSMEM1Q8N8F7 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
LSMEM1Q8N8F7 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC23.81■■□□□ 1.4
LSMEM1Q8N8F7 SUZ12P1-203ENST00000578195 985 ntBASIC23.81■■□□□ 1.4
LSMEM1Q8N8F7 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC23.81■■□□□ 1.4
LSMEM1Q8N8F7 CHML-205ENST00000638160 705 ntTSL 3 BASIC23.81■■□□□ 1.4
LSMEM1Q8N8F7 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
LSMEM1Q8N8F7 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
LSMEM1Q8N8F7 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
LSMEM1Q8N8F7 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
LSMEM1Q8N8F7 AC135731.1-201ENST00000569415 2548 ntBASIC23.8■■□□□ 1.4
LSMEM1Q8N8F7 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC23.8■■□□□ 1.4
LSMEM1Q8N8F7 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
LSMEM1Q8N8F7 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
LSMEM1Q8N8F7 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
LSMEM1Q8N8F7 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
LSMEM1Q8N8F7 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
LSMEM1Q8N8F7 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
LSMEM1Q8N8F7 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
LSMEM1Q8N8F7 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC23.76■■□□□ 1.39
LSMEM1Q8N8F7 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
LSMEM1Q8N8F7 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
LSMEM1Q8N8F7 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC23.74■■□□□ 1.39
LSMEM1Q8N8F7 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
LSMEM1Q8N8F7 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC23.73■■□□□ 1.39
LSMEM1Q8N8F7 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
LSMEM1Q8N8F7 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
LSMEM1Q8N8F7 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC23.72■■□□□ 1.39
LSMEM1Q8N8F7 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
LSMEM1Q8N8F7 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms