Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
PCDH20Q8N6Y1 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
PCDH20Q8N6Y1 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
PCDH20Q8N6Y1 MLEC-202ENST00000412616 841 ntTSL 3 BASIC26.82■■□□□ 1.88
PCDH20Q8N6Y1 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
PCDH20Q8N6Y1 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC26.81■■□□□ 1.88
PCDH20Q8N6Y1 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC26.81■■□□□ 1.88
PCDH20Q8N6Y1 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
PCDH20Q8N6Y1 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
PCDH20Q8N6Y1 MIR6090-201ENST00000622481 60 ntBASIC26.8■■□□□ 1.88
PCDH20Q8N6Y1 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
PCDH20Q8N6Y1 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC26.79■■□□□ 1.88
PCDH20Q8N6Y1 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
PCDH20Q8N6Y1 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
PCDH20Q8N6Y1 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC26.77■■□□□ 1.88
PCDH20Q8N6Y1 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
PCDH20Q8N6Y1 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC26.76■■□□□ 1.87
PCDH20Q8N6Y1 CIB2-204ENST00000557846 934 ntTSL 3 BASIC26.76■■□□□ 1.87
PCDH20Q8N6Y1 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
PCDH20Q8N6Y1 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC26.75■■□□□ 1.87
PCDH20Q8N6Y1 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC26.75■■□□□ 1.87
PCDH20Q8N6Y1 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC26.74■■□□□ 1.87
PCDH20Q8N6Y1 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
PCDH20Q8N6Y1 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC26.74■■□□□ 1.87
PCDH20Q8N6Y1 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC26.74■■□□□ 1.87
PCDH20Q8N6Y1 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC26.74■■□□□ 1.87
PCDH20Q8N6Y1 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC26.74■■□□□ 1.87
PCDH20Q8N6Y1 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC26.73■■□□□ 1.87
PCDH20Q8N6Y1 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
PCDH20Q8N6Y1 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC26.73■■□□□ 1.87
PCDH20Q8N6Y1 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC26.73■■□□□ 1.87
PCDH20Q8N6Y1 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC26.73■■□□□ 1.87
PCDH20Q8N6Y1 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC26.73■■□□□ 1.87
PCDH20Q8N6Y1 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC26.73■■□□□ 1.87
PCDH20Q8N6Y1 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC26.73■■□□□ 1.87
PCDH20Q8N6Y1 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
PCDH20Q8N6Y1 ABHD17AP4-201ENST00000411545 909 ntBASIC26.72■■□□□ 1.87
PCDH20Q8N6Y1 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
PCDH20Q8N6Y1 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC26.71■■□□□ 1.87
PCDH20Q8N6Y1 DUX4L29-201ENST00000425409 679 ntBASIC26.71■■□□□ 1.87
PCDH20Q8N6Y1 AC010864.1-201ENST00000609407 1511 ntBASIC26.7■■□□□ 1.87
PCDH20Q8N6Y1 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
PCDH20Q8N6Y1 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC26.68■■□□□ 1.86
PCDH20Q8N6Y1 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC26.68■■□□□ 1.86
PCDH20Q8N6Y1 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC26.68■■□□□ 1.86
PCDH20Q8N6Y1 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
PCDH20Q8N6Y1 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC26.67■■□□□ 1.86
PCDH20Q8N6Y1 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC26.67■■□□□ 1.86
PCDH20Q8N6Y1 HGH1-207ENST00000628266 258 ntTSL 5 BASIC26.67■■□□□ 1.86
PCDH20Q8N6Y1 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC26.67■■□□□ 1.86
PCDH20Q8N6Y1 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC26.67■■□□□ 1.86
PCDH20Q8N6Y1 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
PCDH20Q8N6Y1 AC021231.2-201ENST00000594613 730 ntBASIC26.65■■□□□ 1.86
PCDH20Q8N6Y1 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
PCDH20Q8N6Y1 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
PCDH20Q8N6Y1 AL135925.1-201ENST00000605920 1701 ntBASIC26.64■■□□□ 1.85
PCDH20Q8N6Y1 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
PCDH20Q8N6Y1 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
PCDH20Q8N6Y1 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
PCDH20Q8N6Y1 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
PCDH20Q8N6Y1 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
PCDH20Q8N6Y1 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC26.62■■□□□ 1.85
PCDH20Q8N6Y1 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
PCDH20Q8N6Y1 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
PCDH20Q8N6Y1 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
PCDH20Q8N6Y1 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
PCDH20Q8N6Y1 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
PCDH20Q8N6Y1 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
PCDH20Q8N6Y1 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
PCDH20Q8N6Y1 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC26.59■■□□□ 1.85
PCDH20Q8N6Y1 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC26.59■■□□□ 1.85
PCDH20Q8N6Y1 ZNRF2P2-203ENST00000454624 420 ntBASIC26.59■■□□□ 1.85
PCDH20Q8N6Y1 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
PCDH20Q8N6Y1 EI24-212ENST00000615917 1407 ntTSL 2 BASIC26.57■■□□□ 1.84
PCDH20Q8N6Y1 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
PCDH20Q8N6Y1 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
PCDH20Q8N6Y1 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
PCDH20Q8N6Y1 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
PCDH20Q8N6Y1 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC26.56■■□□□ 1.84
PCDH20Q8N6Y1 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
PCDH20Q8N6Y1 ABCB10P1-201ENST00000614297 2181 ntBASIC26.56■■□□□ 1.84
PCDH20Q8N6Y1 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC26.55■■□□□ 1.84
PCDH20Q8N6Y1 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
PCDH20Q8N6Y1 MIR7108-201ENST00000614319 87 ntBASIC26.54■■□□□ 1.84
PCDH20Q8N6Y1 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
PCDH20Q8N6Y1 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC26.54■■□□□ 1.84
PCDH20Q8N6Y1 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC26.53■■□□□ 1.84
PCDH20Q8N6Y1 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
PCDH20Q8N6Y1 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
PCDH20Q8N6Y1 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC26.52■■□□□ 1.84
PCDH20Q8N6Y1 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.84
PCDH20Q8N6Y1 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC26.51■■□□□ 1.83
PCDH20Q8N6Y1 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC26.51■■□□□ 1.83
PCDH20Q8N6Y1 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC26.5■■□□□ 1.83
PCDH20Q8N6Y1 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PCDH20Q8N6Y1 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC26.5■■□□□ 1.83
PCDH20Q8N6Y1 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PCDH20Q8N6Y1 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
PCDH20Q8N6Y1 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
PCDH20Q8N6Y1 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC26.49■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms