Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
CCDC60Q8IWA6 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC29.59■■■□□ 2.33
CCDC60Q8IWA6 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
CCDC60Q8IWA6 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC29.58■■■□□ 2.33
CCDC60Q8IWA6 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
CCDC60Q8IWA6 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC29.56■■■□□ 2.32
CCDC60Q8IWA6 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
CCDC60Q8IWA6 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC29.55■■■□□ 2.32
CCDC60Q8IWA6 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC29.55■■■□□ 2.32
CCDC60Q8IWA6 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC29.55■■■□□ 2.32
CCDC60Q8IWA6 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
CCDC60Q8IWA6 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
CCDC60Q8IWA6 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC29.52■■■□□ 2.32
CCDC60Q8IWA6 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
CCDC60Q8IWA6 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC29.52■■■□□ 2.32
CCDC60Q8IWA6 PVT1-219ENST00000523427 938 ntTSL 3 BASIC29.51■■■□□ 2.31
CCDC60Q8IWA6 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC29.51■■■□□ 2.31
CCDC60Q8IWA6 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
CCDC60Q8IWA6 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
CCDC60Q8IWA6 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
CCDC60Q8IWA6 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC29.49■■■□□ 2.31
CCDC60Q8IWA6 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
CCDC60Q8IWA6 AC010864.1-201ENST00000609407 1511 ntBASIC29.48■■■□□ 2.31
CCDC60Q8IWA6 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC29.48■■■□□ 2.31
CCDC60Q8IWA6 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC29.47■■■□□ 2.31
CCDC60Q8IWA6 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
CCDC60Q8IWA6 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
CCDC60Q8IWA6 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC29.45■■■□□ 2.31
CCDC60Q8IWA6 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
CCDC60Q8IWA6 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC29.44■■■□□ 2.3
CCDC60Q8IWA6 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC29.44■■■□□ 2.3
CCDC60Q8IWA6 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
CCDC60Q8IWA6 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC29.44■■■□□ 2.3
CCDC60Q8IWA6 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
CCDC60Q8IWA6 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC29.42■■■□□ 2.3
CCDC60Q8IWA6 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC29.41■■■□□ 2.3
CCDC60Q8IWA6 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
CCDC60Q8IWA6 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC29.41■■■□□ 2.3
CCDC60Q8IWA6 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
CCDC60Q8IWA6 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC29.39■■■□□ 2.3
CCDC60Q8IWA6 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
CCDC60Q8IWA6 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC29.37■■■□□ 2.29
CCDC60Q8IWA6 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
CCDC60Q8IWA6 AL135925.1-201ENST00000605920 1701 ntBASIC29.36■■■□□ 2.29
CCDC60Q8IWA6 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
CCDC60Q8IWA6 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
CCDC60Q8IWA6 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC29.35■■■□□ 2.29
CCDC60Q8IWA6 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC29.34■■■□□ 2.29
CCDC60Q8IWA6 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC29.34■■■□□ 2.29
CCDC60Q8IWA6 EI24-212ENST00000615917 1407 ntTSL 2 BASIC29.34■■■□□ 2.29
CCDC60Q8IWA6 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
CCDC60Q8IWA6 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC29.32■■■□□ 2.28
CCDC60Q8IWA6 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC29.31■■■□□ 2.28
CCDC60Q8IWA6 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC29.3■■■□□ 2.28
CCDC60Q8IWA6 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC29.3■■■□□ 2.28
CCDC60Q8IWA6 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
CCDC60Q8IWA6 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
CCDC60Q8IWA6 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC29.28■■■□□ 2.28
CCDC60Q8IWA6 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
CCDC60Q8IWA6 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
CCDC60Q8IWA6 LINC01971-201ENST00000617888 1048 ntBASIC29.27■■■□□ 2.28
CCDC60Q8IWA6 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
CCDC60Q8IWA6 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC29.26■■■□□ 2.28
CCDC60Q8IWA6 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC29.26■■■□□ 2.27
CCDC60Q8IWA6 MBP-237ENST00000579129 1052 ntTSL 5 BASIC29.26■■■□□ 2.27
CCDC60Q8IWA6 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC29.26■■■□□ 2.27
CCDC60Q8IWA6 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
CCDC60Q8IWA6 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
CCDC60Q8IWA6 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
CCDC60Q8IWA6 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC29.25■■■□□ 2.27
CCDC60Q8IWA6 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC29.24■■■□□ 2.27
CCDC60Q8IWA6 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
CCDC60Q8IWA6 HLA-V-202ENST00000446817 847 ntBASIC29.24■■■□□ 2.27
CCDC60Q8IWA6 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC29.24■■■□□ 2.27
CCDC60Q8IWA6 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC29.24■■■□□ 2.27
CCDC60Q8IWA6 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC29.23■■■□□ 2.27
CCDC60Q8IWA6 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC29.23■■■□□ 2.27
CCDC60Q8IWA6 RNF166-209ENST00000567844 633 ntTSL 5 BASIC29.23■■■□□ 2.27
CCDC60Q8IWA6 DUX4L11-201ENST00000611504 1267 ntBASIC29.23■■■□□ 2.27
CCDC60Q8IWA6 DUX4L12-201ENST00000614593 1267 ntBASIC29.23■■■□□ 2.27
CCDC60Q8IWA6 DUX4L14-201ENST00000621227 1267 ntBASIC29.23■■■□□ 2.27
CCDC60Q8IWA6 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
CCDC60Q8IWA6 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC29.22■■■□□ 2.27
CCDC60Q8IWA6 CALM3-209ENST00000597743 577 ntTSL 4 BASIC29.21■■■□□ 2.27
CCDC60Q8IWA6 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
CCDC60Q8IWA6 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC29.2■■■□□ 2.27
CCDC60Q8IWA6 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
CCDC60Q8IWA6 MACF1-219ENST00000484793 834 ntTSL 2 BASIC29.2■■■□□ 2.26
CCDC60Q8IWA6 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC29.2■■■□□ 2.26
CCDC60Q8IWA6 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
CCDC60Q8IWA6 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
CCDC60Q8IWA6 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC29.17■■■□□ 2.26
CCDC60Q8IWA6 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC29.17■■■□□ 2.26
CCDC60Q8IWA6 AC127502.1-201ENST00000399971 1502 ntBASIC29.17■■■□□ 2.26
CCDC60Q8IWA6 RPS2-202ENST00000526522 924 ntTSL 2 BASIC29.17■■■□□ 2.26
CCDC60Q8IWA6 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC29.16■■■□□ 2.26
CCDC60Q8IWA6 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC29.16■■■□□ 2.26
CCDC60Q8IWA6 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
CCDC60Q8IWA6 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC29.16■■■□□ 2.26
CCDC60Q8IWA6 CR559946.2-201ENST00000623684 991 ntBASIC29.15■■■□□ 2.26
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms