Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC34.07■■■■□ 3.04
COL23A1Q86Y22 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC34.07■■■■□ 3.04
COL23A1Q86Y22 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC34.07■■■■□ 3.04
COL23A1Q86Y22 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC34.07■■■■□ 3.04
COL23A1Q86Y22 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC34.07■■■■□ 3.04
COL23A1Q86Y22 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC34.07■■■■□ 3.04
COL23A1Q86Y22 CHML-204ENST00000638121 920 ntTSL 2 BASIC34.07■■■■□ 3.04
COL23A1Q86Y22 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC34.07■■■■□ 3.04
COL23A1Q86Y22 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC34.07■■■■□ 3.04
COL23A1Q86Y22 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC34.06■■■■□ 3.04
COL23A1Q86Y22 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC34.05■■■■□ 3.04
COL23A1Q86Y22 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC34.05■■■■□ 3.04
COL23A1Q86Y22 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC34.03■■■■□ 3.04
COL23A1Q86Y22 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC34.03■■■■□ 3.04
COL23A1Q86Y22 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC34.03■■■■□ 3.04
COL23A1Q86Y22 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC34.03■■■■□ 3.04
COL23A1Q86Y22 GPX1-201ENST00000419349 1106 ntBASIC34■■■■□ 3.03
COL23A1Q86Y22 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC34■■■■□ 3.03
COL23A1Q86Y22 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC34■■■■□ 3.03
COL23A1Q86Y22 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC33.99■■■■□ 3.03
COL23A1Q86Y22 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC33.99■■■■□ 3.03
COL23A1Q86Y22 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC33.99■■■■□ 3.03
COL23A1Q86Y22 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC33.98■■■■□ 3.03
COL23A1Q86Y22 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC33.98■■■■□ 3.03
COL23A1Q86Y22 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC33.98■■■■□ 3.03
COL23A1Q86Y22 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC33.96■■■■□ 3.03
COL23A1Q86Y22 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC33.96■■■■□ 3.03
COL23A1Q86Y22 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC33.95■■■■□ 3.02
COL23A1Q86Y22 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC33.95■■■■□ 3.02
COL23A1Q86Y22 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC33.94■■■■□ 3.02
COL23A1Q86Y22 RNF126P1-201ENST00000567452 1320 ntBASIC33.94■■■■□ 3.02
COL23A1Q86Y22 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC33.93■■■■□ 3.02
COL23A1Q86Y22 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC33.93■■■■□ 3.02
COL23A1Q86Y22 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC33.93■■■■□ 3.02
COL23A1Q86Y22 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC33.92■■■■□ 3.02
COL23A1Q86Y22 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC33.91■■■■□ 3.02
COL23A1Q86Y22 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC33.91■■■■□ 3.02
COL23A1Q86Y22 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC33.89■■■■□ 3.02
COL23A1Q86Y22 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC33.88■■■■□ 3.01
COL23A1Q86Y22 EI24-212ENST00000615917 1407 ntTSL 2 BASIC33.87■■■■□ 3.01
COL23A1Q86Y22 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC33.87■■■■□ 3.01
COL23A1Q86Y22 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC33.87■■■■□ 3.01
COL23A1Q86Y22 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC33.87■■■■□ 3.01
COL23A1Q86Y22 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC33.87■■■■□ 3.01
COL23A1Q86Y22 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC33.87■■■■□ 3.01
COL23A1Q86Y22 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC33.87■■■■□ 3.01
COL23A1Q86Y22 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC33.86■■■■□ 3.01
COL23A1Q86Y22 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC33.85■■■■□ 3.01
COL23A1Q86Y22 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC33.85■■■■□ 3.01
COL23A1Q86Y22 TPT1-202ENST00000379055 948 ntTSL 2 BASIC33.84■■■■□ 3.01
COL23A1Q86Y22 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC33.83■■■■□ 3.01
COL23A1Q86Y22 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC33.82■■■■□ 3
COL23A1Q86Y22 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC33.81■■■■□ 3
COL23A1Q86Y22 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC33.81■■■■□ 3
COL23A1Q86Y22 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC33.8■■■■□ 3
COL23A1Q86Y22 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC33.8■■■■□ 3
COL23A1Q86Y22 CHST11-202ENST00000546689 756 ntTSL 2 BASIC33.8■■■■□ 3
COL23A1Q86Y22 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC33.79■■■■□ 3
COL23A1Q86Y22 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC33.77■■■■□ 3
COL23A1Q86Y22 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC33.76■■■■□ 3
COL23A1Q86Y22 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC33.76■■■□□ 2.99
COL23A1Q86Y22 CEP120-209ENST00000515110 606 ntTSL 3 BASIC33.76■■■□□ 2.99
COL23A1Q86Y22 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC33.76■■■□□ 2.99
COL23A1Q86Y22 NTF6A-201ENST00000591175 560 ntBASIC33.75■■■□□ 2.99
COL23A1Q86Y22 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC33.74■■■□□ 2.99
COL23A1Q86Y22 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC33.73■■■□□ 2.99
COL23A1Q86Y22 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC33.73■■■□□ 2.99
COL23A1Q86Y22 AC012354.3-201ENST00000623734 483 ntBASIC33.73■■■□□ 2.99
COL23A1Q86Y22 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC33.72■■■□□ 2.99
COL23A1Q86Y22 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC33.72■■■□□ 2.99
COL23A1Q86Y22 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC33.71■■■□□ 2.99
COL23A1Q86Y22 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC33.71■■■□□ 2.99
COL23A1Q86Y22 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC33.7■■■□□ 2.99
COL23A1Q86Y22 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC33.69■■■□□ 2.98
COL23A1Q86Y22 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC33.69■■■□□ 2.98
COL23A1Q86Y22 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC33.69■■■□□ 2.98
COL23A1Q86Y22 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC33.68■■■□□ 2.98
COL23A1Q86Y22 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC33.68■■■□□ 2.98
COL23A1Q86Y22 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC33.65■■■□□ 2.98
COL23A1Q86Y22 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC33.64■■■□□ 2.98
COL23A1Q86Y22 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC33.64■■■□□ 2.98
COL23A1Q86Y22 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC33.64■■■□□ 2.98
COL23A1Q86Y22 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC33.64■■■□□ 2.98
COL23A1Q86Y22 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC33.64■■■□□ 2.98
COL23A1Q86Y22 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC33.63■■■□□ 2.97
COL23A1Q86Y22 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC33.63■■■□□ 2.97
COL23A1Q86Y22 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC33.62■■■□□ 2.97
COL23A1Q86Y22 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC33.62■■■□□ 2.97
COL23A1Q86Y22 AC022413.1-201ENST00000624602 984 ntBASIC33.6■■■□□ 2.97
COL23A1Q86Y22 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC33.6■■■□□ 2.97
COL23A1Q86Y22 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC33.59■■■□□ 2.97
COL23A1Q86Y22 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC33.59■■■□□ 2.97
COL23A1Q86Y22 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC33.58■■■□□ 2.97
COL23A1Q86Y22 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC33.58■■■□□ 2.97
COL23A1Q86Y22 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC33.58■■■□□ 2.97
COL23A1Q86Y22 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC33.57■■■□□ 2.96
COL23A1Q86Y22 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC33.56■■■□□ 2.96
COL23A1Q86Y22 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC33.55■■■□□ 2.96
COL23A1Q86Y22 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC33.54■■■□□ 2.96
COL23A1Q86Y22 AL033527.3-201ENST00000566366 1196 ntBASIC33.53■■■□□ 2.96
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms