Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
RNF44Q7L0R7 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC25.22■■□□□ 1.63
RNF44Q7L0R7 AL135925.1-201ENST00000605920 1701 ntBASIC25.22■■□□□ 1.63
RNF44Q7L0R7 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
RNF44Q7L0R7 ST7-205ENST00000393446 2114 ntTSL 5 BASIC25.22■■□□□ 1.63
RNF44Q7L0R7 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
RNF44Q7L0R7 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
RNF44Q7L0R7 BOD1-206ENST00000480951 814 ntTSL 2 BASIC25.21■■□□□ 1.63
RNF44Q7L0R7 MIR6090-201ENST00000622481 60 ntBASIC25.21■■□□□ 1.63
RNF44Q7L0R7 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
RNF44Q7L0R7 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
RNF44Q7L0R7 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC25.2■■□□□ 1.62
RNF44Q7L0R7 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC25.19■■□□□ 1.62
RNF44Q7L0R7 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC25.18■■□□□ 1.62
RNF44Q7L0R7 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
RNF44Q7L0R7 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC25.18■■□□□ 1.62
RNF44Q7L0R7 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
RNF44Q7L0R7 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
RNF44Q7L0R7 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC25.17■■□□□ 1.62
RNF44Q7L0R7 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC25.17■■□□□ 1.62
RNF44Q7L0R7 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
RNF44Q7L0R7 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC25.15■■□□□ 1.62
RNF44Q7L0R7 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
RNF44Q7L0R7 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
RNF44Q7L0R7 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
RNF44Q7L0R7 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.61
RNF44Q7L0R7 ST7-202ENST00000323984 2142 ntTSL 5 BASIC25.13■■□□□ 1.61
RNF44Q7L0R7 ST7-207ENST00000393449 2127 ntTSL 5 BASIC25.13■■□□□ 1.61
RNF44Q7L0R7 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
RNF44Q7L0R7 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC25.13■■□□□ 1.61
RNF44Q7L0R7 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC25.12■■□□□ 1.61
RNF44Q7L0R7 CIB2-204ENST00000557846 934 ntTSL 3 BASIC25.11■■□□□ 1.61
RNF44Q7L0R7 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC25.11■■□□□ 1.61
RNF44Q7L0R7 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RNF44Q7L0R7 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC25.09■■□□□ 1.61
RNF44Q7L0R7 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC25.09■■□□□ 1.61
RNF44Q7L0R7 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC25.09■■□□□ 1.61
RNF44Q7L0R7 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
RNF44Q7L0R7 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
RNF44Q7L0R7 MLEC-202ENST00000412616 841 ntTSL 3 BASIC25.08■■□□□ 1.61
RNF44Q7L0R7 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC25.07■■□□□ 1.6
RNF44Q7L0R7 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC25.06■■□□□ 1.6
RNF44Q7L0R7 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
RNF44Q7L0R7 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
RNF44Q7L0R7 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC25.05■■□□□ 1.6
RNF44Q7L0R7 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
RNF44Q7L0R7 ST7-AS1-201ENST00000456775 1889 ntBASIC25.04■■□□□ 1.6
RNF44Q7L0R7 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RNF44Q7L0R7 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RNF44Q7L0R7 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC25.04■■□□□ 1.6
RNF44Q7L0R7 DUX4L29-201ENST00000425409 679 ntBASIC25.04■■□□□ 1.6
RNF44Q7L0R7 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC25.04■■□□□ 1.6
RNF44Q7L0R7 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
RNF44Q7L0R7 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RNF44Q7L0R7 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RNF44Q7L0R7 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
RNF44Q7L0R7 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC25.03■■□□□ 1.6
RNF44Q7L0R7 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
RNF44Q7L0R7 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC25.03■■□□□ 1.6
RNF44Q7L0R7 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
RNF44Q7L0R7 AC021231.2-201ENST00000594613 730 ntBASIC25.02■■□□□ 1.6
RNF44Q7L0R7 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC25.02■■□□□ 1.6
RNF44Q7L0R7 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC25.02■■□□□ 1.6
RNF44Q7L0R7 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
RNF44Q7L0R7 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC25.01■■□□□ 1.59
RNF44Q7L0R7 HGH1-207ENST00000628266 258 ntTSL 5 BASIC25.01■■□□□ 1.59
RNF44Q7L0R7 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
RNF44Q7L0R7 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
RNF44Q7L0R7 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
RNF44Q7L0R7 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC25■■□□□ 1.59
RNF44Q7L0R7 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC25■■□□□ 1.59
RNF44Q7L0R7 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
RNF44Q7L0R7 EI24-212ENST00000615917 1407 ntTSL 2 BASIC24.98■■□□□ 1.59
RNF44Q7L0R7 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC24.98■■□□□ 1.59
RNF44Q7L0R7 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
RNF44Q7L0R7 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
RNF44Q7L0R7 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
RNF44Q7L0R7 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
RNF44Q7L0R7 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
RNF44Q7L0R7 ABHD17AP4-201ENST00000411545 909 ntBASIC24.97■■□□□ 1.59
RNF44Q7L0R7 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC24.97■■□□□ 1.59
RNF44Q7L0R7 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
RNF44Q7L0R7 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC24.97■■□□□ 1.59
RNF44Q7L0R7 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
RNF44Q7L0R7 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
RNF44Q7L0R7 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC24.95■■□□□ 1.58
RNF44Q7L0R7 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC24.95■■□□□ 1.58
RNF44Q7L0R7 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC24.95■■□□□ 1.58
RNF44Q7L0R7 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
RNF44Q7L0R7 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
RNF44Q7L0R7 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
RNF44Q7L0R7 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC24.93■■□□□ 1.58
RNF44Q7L0R7 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC24.92■■□□□ 1.58
RNF44Q7L0R7 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
RNF44Q7L0R7 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
RNF44Q7L0R7 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC24.92■■□□□ 1.58
RNF44Q7L0R7 AC127502.1-201ENST00000399971 1502 ntBASIC24.91■■□□□ 1.58
RNF44Q7L0R7 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC24.91■■□□□ 1.58
RNF44Q7L0R7 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
RNF44Q7L0R7 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms