Protein–RNA interactions for Protein: Q53EP0

FNDC3B, Fibronectin type III domain-containing protein 3B, humanhuman

Known RBP Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3BQ53EP0 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
FNDC3BQ53EP0 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC26.83■■□□□ 1.89
FNDC3BQ53EP0 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC26.83■■□□□ 1.89
FNDC3BQ53EP0 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
FNDC3BQ53EP0 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
FNDC3BQ53EP0 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
FNDC3BQ53EP0 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC26.81■■□□□ 1.88
FNDC3BQ53EP0 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
FNDC3BQ53EP0 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
FNDC3BQ53EP0 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
FNDC3BQ53EP0 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC26.78■■□□□ 1.88
FNDC3BQ53EP0 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC26.77■■□□□ 1.88
FNDC3BQ53EP0 RNF166-209ENST00000567844 633 ntTSL 5 BASIC26.75■■□□□ 1.87
FNDC3BQ53EP0 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
FNDC3BQ53EP0 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC26.75■■□□□ 1.87
FNDC3BQ53EP0 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
FNDC3BQ53EP0 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
FNDC3BQ53EP0 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
FNDC3BQ53EP0 LINC01971-201ENST00000617888 1048 ntBASIC26.74■■□□□ 1.87
FNDC3BQ53EP0 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
FNDC3BQ53EP0 EI24-212ENST00000615917 1407 ntTSL 2 BASIC26.73■■□□□ 1.87
FNDC3BQ53EP0 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
FNDC3BQ53EP0 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
FNDC3BQ53EP0 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
FNDC3BQ53EP0 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC26.71■■□□□ 1.87
FNDC3BQ53EP0 MACF1-219ENST00000484793 834 ntTSL 2 BASIC26.71■■□□□ 1.87
FNDC3BQ53EP0 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC26.71■■□□□ 1.87
FNDC3BQ53EP0 DUX4L11-201ENST00000611504 1267 ntBASIC26.7■■□□□ 1.86
FNDC3BQ53EP0 DUX4L12-201ENST00000614593 1267 ntBASIC26.7■■□□□ 1.86
FNDC3BQ53EP0 DUX4L14-201ENST00000621227 1267 ntBASIC26.7■■□□□ 1.86
FNDC3BQ53EP0 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC26.69■■□□□ 1.86
FNDC3BQ53EP0 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC26.69■■□□□ 1.86
FNDC3BQ53EP0 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC26.69■■□□□ 1.86
FNDC3BQ53EP0 RPS2-202ENST00000526522 924 ntTSL 2 BASIC26.69■■□□□ 1.86
FNDC3BQ53EP0 AC010864.1-201ENST00000609407 1511 ntBASIC26.68■■□□□ 1.86
FNDC3BQ53EP0 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC26.68■■□□□ 1.86
FNDC3BQ53EP0 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
FNDC3BQ53EP0 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
FNDC3BQ53EP0 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC26.67■■□□□ 1.86
FNDC3BQ53EP0 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC26.67■■□□□ 1.86
FNDC3BQ53EP0 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC26.66■■□□□ 1.86
FNDC3BQ53EP0 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC26.65■■□□□ 1.86
FNDC3BQ53EP0 GDI1-215ENST00000630693 786 ntTSL 4 BASIC26.65■■□□□ 1.86
FNDC3BQ53EP0 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
FNDC3BQ53EP0 MIR3648-2-201ENST00000581792 180 ntBASIC26.64■■□□□ 1.86
FNDC3BQ53EP0 AC016575.1-201ENST00000607026 382 ntBASIC26.64■■□□□ 1.86
FNDC3BQ53EP0 MIR3648-1-201ENST00000615959 180 ntBASIC26.64■■□□□ 1.86
FNDC3BQ53EP0 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC26.64■■□□□ 1.85
FNDC3BQ53EP0 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
FNDC3BQ53EP0 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
FNDC3BQ53EP0 AGPS-202ENST00000409888 815 ntTSL 4 BASIC26.62■■□□□ 1.85
FNDC3BQ53EP0 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
FNDC3BQ53EP0 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
FNDC3BQ53EP0 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC26.61■■□□□ 1.85
FNDC3BQ53EP0 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
FNDC3BQ53EP0 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
FNDC3BQ53EP0 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC26.61■■□□□ 1.85
FNDC3BQ53EP0 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC26.61■■□□□ 1.85
FNDC3BQ53EP0 CR559946.2-201ENST00000623684 991 ntBASIC26.6■■□□□ 1.85
FNDC3BQ53EP0 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
FNDC3BQ53EP0 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC26.59■■□□□ 1.85
FNDC3BQ53EP0 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC26.59■■□□□ 1.85
FNDC3BQ53EP0 MIR639-201ENST00000384974 98 ntBASIC26.59■■□□□ 1.85
FNDC3BQ53EP0 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC26.58■■□□□ 1.85
FNDC3BQ53EP0 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
FNDC3BQ53EP0 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
FNDC3BQ53EP0 CALM3-209ENST00000597743 577 ntTSL 4 BASIC26.58■■□□□ 1.85
FNDC3BQ53EP0 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
FNDC3BQ53EP0 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
FNDC3BQ53EP0 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
FNDC3BQ53EP0 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC26.57■■□□□ 1.84
FNDC3BQ53EP0 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
FNDC3BQ53EP0 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
FNDC3BQ53EP0 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
FNDC3BQ53EP0 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC26.55■■□□□ 1.84
FNDC3BQ53EP0 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
FNDC3BQ53EP0 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC26.53■■□□□ 1.84
FNDC3BQ53EP0 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
FNDC3BQ53EP0 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC26.53■■□□□ 1.84
FNDC3BQ53EP0 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC26.53■■□□□ 1.84
FNDC3BQ53EP0 MIR4449-201ENST00000578365 66 ntBASIC26.53■■□□□ 1.84
FNDC3BQ53EP0 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
FNDC3BQ53EP0 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
FNDC3BQ53EP0 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
FNDC3BQ53EP0 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC26.52■■□□□ 1.84
FNDC3BQ53EP0 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
FNDC3BQ53EP0 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
FNDC3BQ53EP0 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
FNDC3BQ53EP0 DUX4L13-201ENST00000554103 1267 ntBASIC26.51■■□□□ 1.83
FNDC3BQ53EP0 DUX4L15-201ENST00000611059 1267 ntBASIC26.51■■□□□ 1.83
FNDC3BQ53EP0 DUX4L23-201ENST00000615195 1269 ntBASIC26.51■■□□□ 1.83
FNDC3BQ53EP0 DUX4L24-201ENST00000617576 1269 ntBASIC26.51■■□□□ 1.83
FNDC3BQ53EP0 DUX4L22-201ENST00000618238 1269 ntBASIC26.51■■□□□ 1.83
FNDC3BQ53EP0 DUX4L20-201ENST00000619712 1269 ntBASIC26.51■■□□□ 1.83
FNDC3BQ53EP0 DUX4L21-201ENST00000622058 1269 ntBASIC26.51■■□□□ 1.83
FNDC3BQ53EP0 DUX4L10-201ENST00000622460 1267 ntBASIC26.51■■□□□ 1.83
FNDC3BQ53EP0 DUX4L25-201ENST00000624915 1269 ntBASIC26.51■■□□□ 1.83
FNDC3BQ53EP0 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC26.5■■□□□ 1.83
FNDC3BQ53EP0 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
FNDC3BQ53EP0 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms