Protein–RNA interactions for Protein: P61129

ZC3H6, Zinc finger CCCH domain-containing protein 6, humanhuman

Known RBP Predictions only

Length 1,189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H6P61129 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC36.04■■■■□ 3.36
ZC3H6P61129 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC36.04■■■■□ 3.36
ZC3H6P61129 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC36.03■■■■□ 3.36
ZC3H6P61129 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC36.03■■■■□ 3.36
ZC3H6P61129 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC36.02■■■■□ 3.36
ZC3H6P61129 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC36.02■■■■□ 3.36
ZC3H6P61129 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC36■■■■□ 3.35
ZC3H6P61129 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC36■■■■□ 3.35
ZC3H6P61129 HES6-205ENST00000409356 528 ntTSL 2 BASIC35.99■■■■□ 3.35
ZC3H6P61129 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC35.96■■■■□ 3.35
ZC3H6P61129 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC35.96■■■■□ 3.35
ZC3H6P61129 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC35.96■■■■□ 3.35
ZC3H6P61129 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC35.95■■■■□ 3.35
ZC3H6P61129 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC35.94■■■■□ 3.34
ZC3H6P61129 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC35.94■■■■□ 3.34
ZC3H6P61129 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC35.93■■■■□ 3.34
ZC3H6P61129 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC35.93■■■■□ 3.34
ZC3H6P61129 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC35.93■■■■□ 3.34
ZC3H6P61129 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC35.92■■■■□ 3.34
ZC3H6P61129 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC35.92■■■■□ 3.34
ZC3H6P61129 CHML-204ENST00000638121 920 ntTSL 2 BASIC35.91■■■■□ 3.34
ZC3H6P61129 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC35.9■■■■□ 3.34
ZC3H6P61129 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC35.89■■■■□ 3.34
ZC3H6P61129 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC35.88■■■■□ 3.33
ZC3H6P61129 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC35.87■■■■□ 3.33
ZC3H6P61129 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC35.86■■■■□ 3.33
ZC3H6P61129 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC35.86■■■■□ 3.33
ZC3H6P61129 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC35.86■■■■□ 3.33
ZC3H6P61129 EI24-212ENST00000615917 1407 ntTSL 2 BASIC35.85■■■■□ 3.33
ZC3H6P61129 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC35.85■■■■□ 3.33
ZC3H6P61129 SRP68-213ENST00000629930 165 ntTSL 5 BASIC35.84■■■■□ 3.33
ZC3H6P61129 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC35.81■■■■□ 3.32
ZC3H6P61129 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC35.8■■■■□ 3.32
ZC3H6P61129 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC35.8■■■■□ 3.32
ZC3H6P61129 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC35.8■■■■□ 3.32
ZC3H6P61129 RARRES2P2-201ENST00000394842 485 ntBASIC35.79■■■■□ 3.32
ZC3H6P61129 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC35.79■■■■□ 3.32
ZC3H6P61129 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC35.79■■■■□ 3.32
ZC3H6P61129 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC35.79■■■■□ 3.32
ZC3H6P61129 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC35.78■■■■□ 3.32
ZC3H6P61129 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC35.78■■■■□ 3.32
ZC3H6P61129 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC35.78■■■■□ 3.32
ZC3H6P61129 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC35.78■■■■□ 3.32
ZC3H6P61129 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC35.78■■■■□ 3.32
ZC3H6P61129 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC35.78■■■■□ 3.32
ZC3H6P61129 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC35.78■■■■□ 3.32
ZC3H6P61129 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC35.78■■■■□ 3.32
ZC3H6P61129 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC35.78■■■■□ 3.32
ZC3H6P61129 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC35.78■■■■□ 3.32
ZC3H6P61129 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC35.78■■■■□ 3.32
ZC3H6P61129 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC35.77■■■■□ 3.32
ZC3H6P61129 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC35.77■■■■□ 3.32
ZC3H6P61129 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC35.77■■■■□ 3.32
ZC3H6P61129 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC35.77■■■■□ 3.32
ZC3H6P61129 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC35.77■■■■□ 3.32
ZC3H6P61129 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC35.76■■■■□ 3.31
ZC3H6P61129 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC35.75■■■■□ 3.31
ZC3H6P61129 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC35.74■■■■□ 3.31
ZC3H6P61129 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC35.74■■■■□ 3.31
ZC3H6P61129 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC35.73■■■■□ 3.31
ZC3H6P61129 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC35.72■■■■□ 3.31
ZC3H6P61129 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC35.72■■■■□ 3.31
ZC3H6P61129 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC35.71■■■■□ 3.31
ZC3H6P61129 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC35.71■■■■□ 3.31
ZC3H6P61129 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC35.71■■■■□ 3.31
ZC3H6P61129 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC35.71■■■■□ 3.31
ZC3H6P61129 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC35.71■■■■□ 3.31
ZC3H6P61129 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC35.69■■■■□ 3.3
ZC3H6P61129 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC35.69■■■■□ 3.3
ZC3H6P61129 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC35.69■■■■□ 3.3
ZC3H6P61129 CHST11-202ENST00000546689 756 ntTSL 2 BASIC35.68■■■■□ 3.3
ZC3H6P61129 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC35.68■■■■□ 3.3
ZC3H6P61129 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC35.68■■■■□ 3.3
ZC3H6P61129 GPX1-201ENST00000419349 1106 ntBASIC35.67■■■■□ 3.3
ZC3H6P61129 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC35.67■■■■□ 3.3
ZC3H6P61129 ABHD17AP5-201ENST00000580133 923 ntBASIC35.67■■■■□ 3.3
ZC3H6P61129 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC35.67■■■■□ 3.3
ZC3H6P61129 AC120057.4-201ENST00000624722 1615 ntBASIC35.67■■■■□ 3.3
ZC3H6P61129 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC35.66■■■■□ 3.3
ZC3H6P61129 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC35.65■■■■□ 3.3
ZC3H6P61129 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC35.64■■■■□ 3.3
ZC3H6P61129 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC35.62■■■■□ 3.29
ZC3H6P61129 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC35.61■■■■□ 3.29
ZC3H6P61129 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC35.6■■■■□ 3.29
ZC3H6P61129 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC35.6■■■■□ 3.29
ZC3H6P61129 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC35.6■■■■□ 3.29
ZC3H6P61129 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC35.59■■■■□ 3.29
ZC3H6P61129 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC35.59■■■■□ 3.29
ZC3H6P61129 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC35.59■■■■□ 3.29
ZC3H6P61129 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC35.58■■■■□ 3.29
ZC3H6P61129 TPT1-202ENST00000379055 948 ntTSL 2 BASIC35.58■■■■□ 3.29
ZC3H6P61129 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC35.55■■■■□ 3.28
ZC3H6P61129 RNF126P1-201ENST00000567452 1320 ntBASIC35.55■■■■□ 3.28
ZC3H6P61129 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC35.54■■■■□ 3.28
ZC3H6P61129 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC35.54■■■■□ 3.28
ZC3H6P61129 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC35.54■■■■□ 3.28
ZC3H6P61129 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC35.54■■■■□ 3.28
ZC3H6P61129 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC35.53■■■■□ 3.28
ZC3H6P61129 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC35.53■■■■□ 3.28
ZC3H6P61129 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC35.53■■■■□ 3.28
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms