Protein–RNA interactions for Protein: P60468

SEC61B, Protein transport protein Sec61 subunit beta, humanhuman

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61BP60468 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC14.21□□□□□ -0.14
SEC61BP60468 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
SEC61BP60468 AC120057.4-201ENST00000624722 1615 ntBASIC14.2□□□□□ -0.14
SEC61BP60468 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC14.2□□□□□ -0.14
SEC61BP60468 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SEC61BP60468 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SEC61BP60468 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SEC61BP60468 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC14.19□□□□□ -0.14
SEC61BP60468 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEC61BP60468 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEC61BP60468 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEC61BP60468 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEC61BP60468 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC14.18□□□□□ -0.14
SEC61BP60468 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SEC61BP60468 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SEC61BP60468 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SEC61BP60468 CR559946.2-201ENST00000623684 991 ntBASIC14.17□□□□□ -0.14
SEC61BP60468 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
SEC61BP60468 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SEC61BP60468 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SEC61BP60468 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SEC61BP60468 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SEC61BP60468 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC14.16□□□□□ -0.14
SEC61BP60468 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SEC61BP60468 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SEC61BP60468 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
SEC61BP60468 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
SEC61BP60468 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SEC61BP60468 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SEC61BP60468 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SEC61BP60468 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SEC61BP60468 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC14.14□□□□□ -0.15
SEC61BP60468 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC14.14□□□□□ -0.15
SEC61BP60468 DUX4L13-201ENST00000554103 1267 ntBASIC14.14□□□□□ -0.15
SEC61BP60468 DUX4L15-201ENST00000611059 1267 ntBASIC14.14□□□□□ -0.15
SEC61BP60468 DUX4L23-201ENST00000615195 1269 ntBASIC14.14□□□□□ -0.15
SEC61BP60468 DUX4L24-201ENST00000617576 1269 ntBASIC14.14□□□□□ -0.15
SEC61BP60468 DUX4L22-201ENST00000618238 1269 ntBASIC14.14□□□□□ -0.15
SEC61BP60468 DUX4L20-201ENST00000619712 1269 ntBASIC14.14□□□□□ -0.15
SEC61BP60468 DUX4L21-201ENST00000622058 1269 ntBASIC14.14□□□□□ -0.15
SEC61BP60468 DUX4L10-201ENST00000622460 1267 ntBASIC14.14□□□□□ -0.15
SEC61BP60468 DUX4L25-201ENST00000624915 1269 ntBASIC14.14□□□□□ -0.15
SEC61BP60468 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC14.14□□□□□ -0.15
SEC61BP60468 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SEC61BP60468 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SEC61BP60468 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SEC61BP60468 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SEC61BP60468 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SEC61BP60468 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SEC61BP60468 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
SEC61BP60468 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SEC61BP60468 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SEC61BP60468 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC14.12□□□□□ -0.15
SEC61BP60468 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC14.12□□□□□ -0.15
SEC61BP60468 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SEC61BP60468 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
SEC61BP60468 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC14.11□□□□□ -0.15
SEC61BP60468 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC14.11□□□□□ -0.15
SEC61BP60468 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SEC61BP60468 HES6-205ENST00000409356 528 ntTSL 2 BASIC14.1□□□□□ -0.15
SEC61BP60468 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SEC61BP60468 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SEC61BP60468 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SEC61BP60468 HSD17B1P1-201ENST00000590052 955 ntBASIC14.09□□□□□ -0.15
SEC61BP60468 CHML-204ENST00000638121 920 ntTSL 2 BASIC14.09□□□□□ -0.15
SEC61BP60468 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SEC61BP60468 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SEC61BP60468 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SEC61BP60468 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SEC61BP60468 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.15
SEC61BP60468 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
SEC61BP60468 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
SEC61BP60468 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SEC61BP60468 ABHD17AP3-201ENST00000503096 1137 ntBASIC14.07□□□□□ -0.16
SEC61BP60468 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC14.07□□□□□ -0.16
SEC61BP60468 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
SEC61BP60468 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SEC61BP60468 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SEC61BP60468 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC14.06□□□□□ -0.16
SEC61BP60468 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
SEC61BP60468 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC14.06□□□□□ -0.16
SEC61BP60468 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SEC61BP60468 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC14.05□□□□□ -0.16
SEC61BP60468 METRNL-202ENST00000570778 967 ntTSL 5 BASIC14.05□□□□□ -0.16
SEC61BP60468 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SEC61BP60468 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SEC61BP60468 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC14.04□□□□□ -0.16
SEC61BP60468 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC14.04□□□□□ -0.16
SEC61BP60468 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SEC61BP60468 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC14.04□□□□□ -0.16
SEC61BP60468 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
SEC61BP60468 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
SEC61BP60468 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SEC61BP60468 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
SEC61BP60468 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
SEC61BP60468 CHST11-202ENST00000546689 756 ntTSL 2 BASIC14.03□□□□□ -0.16
SEC61BP60468 BRD4-212ENST00000630599 726 ntTSL 2 BASIC14.03□□□□□ -0.16
SEC61BP60468 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SEC61BP60468 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SEC61BP60468 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms