Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 MIR6090-201ENST00000622481 60 ntBASIC27.09■■□□□ 1.93
CDH4P55283 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC27.09■■□□□ 1.93
CDH4P55283 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC27.08■■□□□ 1.92
CDH4P55283 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC27.07■■□□□ 1.92
CDH4P55283 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
CDH4P55283 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC27.06■■□□□ 1.92
CDH4P55283 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC27.06■■□□□ 1.92
CDH4P55283 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC27.06■■□□□ 1.92
CDH4P55283 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC27.06■■□□□ 1.92
CDH4P55283 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
CDH4P55283 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC27.05■■□□□ 1.92
CDH4P55283 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC27.04■■□□□ 1.92
CDH4P55283 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC27.04■■□□□ 1.92
CDH4P55283 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC27.04■■□□□ 1.92
CDH4P55283 CIB2-204ENST00000557846 934 ntTSL 3 BASIC27.02■■□□□ 1.92
CDH4P55283 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC27.01■■□□□ 1.92
CDH4P55283 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC27.01■■□□□ 1.92
CDH4P55283 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
CDH4P55283 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC27■■□□□ 1.91
CDH4P55283 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC27■■□□□ 1.91
CDH4P55283 ST7-202ENST00000323984 2142 ntTSL 5 BASIC26.99■■□□□ 1.91
CDH4P55283 ST7-207ENST00000393449 2127 ntTSL 5 BASIC26.99■■□□□ 1.91
CDH4P55283 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
CDH4P55283 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC26.97■■□□□ 1.91
CDH4P55283 MLEC-202ENST00000412616 841 ntTSL 3 BASIC26.97■■□□□ 1.91
CDH4P55283 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC26.97■■□□□ 1.91
CDH4P55283 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
CDH4P55283 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC26.96■■□□□ 1.91
CDH4P55283 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC26.95■■□□□ 1.9
CDH4P55283 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
CDH4P55283 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
CDH4P55283 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
CDH4P55283 DUX4L29-201ENST00000425409 679 ntBASIC26.94■■□□□ 1.9
CDH4P55283 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
CDH4P55283 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC26.93■■□□□ 1.9
CDH4P55283 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC26.93■■□□□ 1.9
CDH4P55283 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC26.93■■□□□ 1.9
CDH4P55283 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC26.93■■□□□ 1.9
CDH4P55283 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC26.93■■□□□ 1.9
CDH4P55283 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC26.92■■□□□ 1.9
CDH4P55283 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC26.91■■□□□ 1.9
CDH4P55283 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC26.91■■□□□ 1.9
CDH4P55283 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CDH4P55283 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
CDH4P55283 AC021231.2-201ENST00000594613 730 ntBASIC26.9■■□□□ 1.9
CDH4P55283 ST7-AS1-201ENST00000456775 1889 ntBASIC26.89■■□□□ 1.9
CDH4P55283 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
CDH4P55283 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC26.89■■□□□ 1.9
CDH4P55283 ABHD17AP4-201ENST00000411545 909 ntBASIC26.89■■□□□ 1.9
CDH4P55283 HGH1-207ENST00000628266 258 ntTSL 5 BASIC26.89■■□□□ 1.9
CDH4P55283 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC26.89■■□□□ 1.89
CDH4P55283 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CDH4P55283 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC26.88■■□□□ 1.89
CDH4P55283 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC26.87■■□□□ 1.89
CDH4P55283 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CDH4P55283 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
CDH4P55283 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CDH4P55283 EI24-212ENST00000615917 1407 ntTSL 2 BASIC26.86■■□□□ 1.89
CDH4P55283 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
CDH4P55283 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CDH4P55283 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CDH4P55283 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CDH4P55283 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CDH4P55283 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
CDH4P55283 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
CDH4P55283 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CDH4P55283 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC26.84■■□□□ 1.89
CDH4P55283 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC26.84■■□□□ 1.89
CDH4P55283 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
CDH4P55283 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CDH4P55283 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC26.82■■□□□ 1.88
CDH4P55283 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CDH4P55283 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
CDH4P55283 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC26.8■■□□□ 1.88
CDH4P55283 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
CDH4P55283 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
CDH4P55283 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CDH4P55283 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC26.79■■□□□ 1.88
CDH4P55283 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC26.79■■□□□ 1.88
CDH4P55283 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
CDH4P55283 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CDH4P55283 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC26.78■■□□□ 1.88
CDH4P55283 ZNRF2P2-203ENST00000454624 420 ntBASIC26.78■■□□□ 1.88
CDH4P55283 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
CDH4P55283 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC26.78■■□□□ 1.88
CDH4P55283 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC26.78■■□□□ 1.88
CDH4P55283 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC26.77■■□□□ 1.88
CDH4P55283 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC26.77■■□□□ 1.88
CDH4P55283 AC127502.1-201ENST00000399971 1502 ntBASIC26.76■■□□□ 1.87
CDH4P55283 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
CDH4P55283 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC26.76■■□□□ 1.87
CDH4P55283 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC26.76■■□□□ 1.87
CDH4P55283 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC26.76■■□□□ 1.87
CDH4P55283 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC26.76■■□□□ 1.87
CDH4P55283 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC26.75■■□□□ 1.87
CDH4P55283 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
CDH4P55283 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC26.74■■□□□ 1.87
CDH4P55283 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CDH4P55283 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
CDH4P55283 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC26.72■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 9.6 ms