Protein–RNA interactions for Protein: P43007

SLC1A4, Neutral amino acid transporter A, humanhuman

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A4P43007 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
SLC1A4P43007 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
SLC1A4P43007 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
SLC1A4P43007 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC30.77■■■□□ 2.52
SLC1A4P43007 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC30.76■■■□□ 2.52
SLC1A4P43007 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
SLC1A4P43007 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC30.76■■■□□ 2.51
SLC1A4P43007 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
SLC1A4P43007 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
SLC1A4P43007 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC30.74■■■□□ 2.51
SLC1A4P43007 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
SLC1A4P43007 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
SLC1A4P43007 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
SLC1A4P43007 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
SLC1A4P43007 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC30.71■■■□□ 2.51
SLC1A4P43007 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
SLC1A4P43007 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
SLC1A4P43007 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
SLC1A4P43007 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
SLC1A4P43007 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC30.67■■■□□ 2.5
SLC1A4P43007 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
SLC1A4P43007 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC30.67■■■□□ 2.5
SLC1A4P43007 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC30.67■■■□□ 2.5
SLC1A4P43007 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC30.67■■■□□ 2.5
SLC1A4P43007 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC30.67■■■□□ 2.5
SLC1A4P43007 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
SLC1A4P43007 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
SLC1A4P43007 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC30.66■■■□□ 2.5
SLC1A4P43007 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC30.64■■■□□ 2.49
SLC1A4P43007 AC010864.1-201ENST00000609407 1511 ntBASIC30.63■■■□□ 2.49
SLC1A4P43007 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
SLC1A4P43007 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC30.62■■■□□ 2.49
SLC1A4P43007 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC30.62■■■□□ 2.49
SLC1A4P43007 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
SLC1A4P43007 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC30.61■■■□□ 2.49
SLC1A4P43007 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
SLC1A4P43007 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC30.6■■■□□ 2.49
SLC1A4P43007 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC30.59■■■□□ 2.49
SLC1A4P43007 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
SLC1A4P43007 EI24-212ENST00000615917 1407 ntTSL 2 BASIC30.58■■■□□ 2.49
SLC1A4P43007 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
SLC1A4P43007 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC30.57■■■□□ 2.48
SLC1A4P43007 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC30.56■■■□□ 2.48
SLC1A4P43007 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
SLC1A4P43007 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC30.56■■■□□ 2.48
SLC1A4P43007 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
SLC1A4P43007 HLA-V-202ENST00000446817 847 ntBASIC30.55■■■□□ 2.48
SLC1A4P43007 MBP-237ENST00000579129 1052 ntTSL 5 BASIC30.55■■■□□ 2.48
SLC1A4P43007 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC30.55■■■□□ 2.48
SLC1A4P43007 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC30.55■■■□□ 2.48
SLC1A4P43007 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
SLC1A4P43007 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
SLC1A4P43007 LINC01971-201ENST00000617888 1048 ntBASIC30.53■■■□□ 2.48
SLC1A4P43007 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
SLC1A4P43007 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC30.52■■■□□ 2.48
SLC1A4P43007 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC30.51■■■□□ 2.47
SLC1A4P43007 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
SLC1A4P43007 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC30.5■■■□□ 2.47
SLC1A4P43007 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC30.49■■■□□ 2.47
SLC1A4P43007 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC30.48■■■□□ 2.47
SLC1A4P43007 RNF166-209ENST00000567844 633 ntTSL 5 BASIC30.48■■■□□ 2.47
SLC1A4P43007 DUX4L11-201ENST00000611504 1267 ntBASIC30.48■■■□□ 2.47
SLC1A4P43007 DUX4L12-201ENST00000614593 1267 ntBASIC30.48■■■□□ 2.47
SLC1A4P43007 DUX4L14-201ENST00000621227 1267 ntBASIC30.48■■■□□ 2.47
SLC1A4P43007 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC30.48■■■□□ 2.47
SLC1A4P43007 AL135925.1-201ENST00000605920 1701 ntBASIC30.47■■■□□ 2.47
SLC1A4P43007 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC30.47■■■□□ 2.47
SLC1A4P43007 ST7-205ENST00000393446 2114 ntTSL 5 BASIC30.47■■■□□ 2.47
SLC1A4P43007 MACF1-219ENST00000484793 834 ntTSL 2 BASIC30.46■■■□□ 2.47
SLC1A4P43007 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC30.46■■■□□ 2.47
SLC1A4P43007 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC30.45■■■□□ 2.47
SLC1A4P43007 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
SLC1A4P43007 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
SLC1A4P43007 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
SLC1A4P43007 CALM3-209ENST00000597743 577 ntTSL 4 BASIC30.42■■■□□ 2.46
SLC1A4P43007 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC30.41■■■□□ 2.46
SLC1A4P43007 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
SLC1A4P43007 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
SLC1A4P43007 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC30.4■■■□□ 2.46
SLC1A4P43007 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
SLC1A4P43007 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
SLC1A4P43007 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC30.39■■■□□ 2.46
SLC1A4P43007 MIR3648-2-201ENST00000581792 180 ntBASIC30.39■■■□□ 2.46
SLC1A4P43007 MIR3648-1-201ENST00000615959 180 ntBASIC30.39■■■□□ 2.46
SLC1A4P43007 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC30.39■■■□□ 2.46
SLC1A4P43007 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
SLC1A4P43007 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC30.38■■■□□ 2.45
SLC1A4P43007 RPS2-202ENST00000526522 924 ntTSL 2 BASIC30.38■■■□□ 2.45
SLC1A4P43007 GDI1-215ENST00000630693 786 ntTSL 4 BASIC30.38■■■□□ 2.45
SLC1A4P43007 AGPS-202ENST00000409888 815 ntTSL 4 BASIC30.37■■■□□ 2.45
SLC1A4P43007 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC30.37■■■□□ 2.45
SLC1A4P43007 ST7-202ENST00000323984 2142 ntTSL 5 BASIC30.37■■■□□ 2.45
SLC1A4P43007 ST7-207ENST00000393449 2127 ntTSL 5 BASIC30.37■■■□□ 2.45
SLC1A4P43007 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC30.36■■■□□ 2.45
SLC1A4P43007 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC30.36■■■□□ 2.45
SLC1A4P43007 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC30.36■■■□□ 2.45
SLC1A4P43007 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
SLC1A4P43007 AC016575.1-201ENST00000607026 382 ntBASIC30.35■■■□□ 2.45
SLC1A4P43007 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC30.35■■■□□ 2.45
SLC1A4P43007 CR559946.2-201ENST00000623684 991 ntBASIC30.35■■■□□ 2.45
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms