Protein–RNA interactions for Protein: P43007

SLC1A4, Neutral amino acid transporter A, humanhuman

Predictions only

Length 532 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A4P43007 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
SLC1A4P43007 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
SLC1A4P43007 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
SLC1A4P43007 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC30.77■■■□□ 2.52
SLC1A4P43007 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC30.76■■■□□ 2.52
SLC1A4P43007 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
SLC1A4P43007 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC30.76■■■□□ 2.51
SLC1A4P43007 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
SLC1A4P43007 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
SLC1A4P43007 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC30.74■■■□□ 2.51
SLC1A4P43007 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
SLC1A4P43007 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
SLC1A4P43007 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
SLC1A4P43007 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
SLC1A4P43007 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC30.71■■■□□ 2.51
SLC1A4P43007 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
SLC1A4P43007 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
SLC1A4P43007 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
SLC1A4P43007 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
SLC1A4P43007 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC30.67■■■□□ 2.5
SLC1A4P43007 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
SLC1A4P43007 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC30.67■■■□□ 2.5
SLC1A4P43007 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC30.67■■■□□ 2.5
SLC1A4P43007 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC30.67■■■□□ 2.5
SLC1A4P43007 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC30.67■■■□□ 2.5
SLC1A4P43007 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
SLC1A4P43007 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
SLC1A4P43007 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC30.66■■■□□ 2.5
SLC1A4P43007 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC30.64■■■□□ 2.49
SLC1A4P43007 AC010864.1-201ENST00000609407 1511 ntBASIC30.63■■■□□ 2.49
SLC1A4P43007 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
SLC1A4P43007 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC30.62■■■□□ 2.49
SLC1A4P43007 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC30.62■■■□□ 2.49
SLC1A4P43007 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
SLC1A4P43007 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC30.61■■■□□ 2.49
SLC1A4P43007 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
SLC1A4P43007 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC30.6■■■□□ 2.49
SLC1A4P43007 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC30.59■■■□□ 2.49
SLC1A4P43007 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
SLC1A4P43007 EI24-212ENST00000615917 1407 ntTSL 2 BASIC30.58■■■□□ 2.49
SLC1A4P43007 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
SLC1A4P43007 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC30.57■■■□□ 2.48
SLC1A4P43007 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC30.56■■■□□ 2.48
SLC1A4P43007 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
SLC1A4P43007 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC30.56■■■□□ 2.48
SLC1A4P43007 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
SLC1A4P43007 HLA-V-202ENST00000446817 847 ntBASIC30.55■■■□□ 2.48
SLC1A4P43007 MBP-237ENST00000579129 1052 ntTSL 5 BASIC30.55■■■□□ 2.48
SLC1A4P43007 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC30.55■■■□□ 2.48
SLC1A4P43007 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC30.55■■■□□ 2.48
SLC1A4P43007 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
SLC1A4P43007 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
SLC1A4P43007 LINC01971-201ENST00000617888 1048 ntBASIC30.53■■■□□ 2.48
SLC1A4P43007 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
SLC1A4P43007 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC30.52■■■□□ 2.48
SLC1A4P43007 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC30.51■■■□□ 2.47
SLC1A4P43007 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
SLC1A4P43007 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC30.5■■■□□ 2.47
SLC1A4P43007 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC30.49■■■□□ 2.47
SLC1A4P43007 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC30.48■■■□□ 2.47
SLC1A4P43007 RNF166-209ENST00000567844 633 ntTSL 5 BASIC30.48■■■□□ 2.47
SLC1A4P43007 DUX4L11-201ENST00000611504 1267 ntBASIC30.48■■■□□ 2.47
SLC1A4P43007 DUX4L12-201ENST00000614593 1267 ntBASIC30.48■■■□□ 2.47
SLC1A4P43007 DUX4L14-201ENST00000621227 1267 ntBASIC30.48■■■□□ 2.47
SLC1A4P43007 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC30.48■■■□□ 2.47
SLC1A4P43007 AL135925.1-201ENST00000605920 1701 ntBASIC30.47■■■□□ 2.47
SLC1A4P43007 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC30.47■■■□□ 2.47
SLC1A4P43007 ST7-205ENST00000393446 2114 ntTSL 5 BASIC30.47■■■□□ 2.47
SLC1A4P43007 MACF1-219ENST00000484793 834 ntTSL 2 BASIC30.46■■■□□ 2.47
SLC1A4P43007 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC30.46■■■□□ 2.47
SLC1A4P43007 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC30.45■■■□□ 2.47
SLC1A4P43007 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
SLC1A4P43007 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
SLC1A4P43007 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
SLC1A4P43007 CALM3-209ENST00000597743 577 ntTSL 4 BASIC30.42■■■□□ 2.46
SLC1A4P43007 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC30.41■■■□□ 2.46
SLC1A4P43007 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
SLC1A4P43007 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
SLC1A4P43007 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC30.4■■■□□ 2.46
SLC1A4P43007 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
SLC1A4P43007 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
SLC1A4P43007 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC30.39■■■□□ 2.46
SLC1A4P43007 MIR3648-2-201ENST00000581792 180 ntBASIC30.39■■■□□ 2.46
SLC1A4P43007 MIR3648-1-201ENST00000615959 180 ntBASIC30.39■■■□□ 2.46
SLC1A4P43007 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC30.39■■■□□ 2.46
SLC1A4P43007 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
SLC1A4P43007 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC30.38■■■□□ 2.45
SLC1A4P43007 RPS2-202ENST00000526522 924 ntTSL 2 BASIC30.38■■■□□ 2.45
SLC1A4P43007 GDI1-215ENST00000630693 786 ntTSL 4 BASIC30.38■■■□□ 2.45
SLC1A4P43007 AGPS-202ENST00000409888 815 ntTSL 4 BASIC30.37■■■□□ 2.45
SLC1A4P43007 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC30.37■■■□□ 2.45
SLC1A4P43007 ST7-202ENST00000323984 2142 ntTSL 5 BASIC30.37■■■□□ 2.45
SLC1A4P43007 ST7-207ENST00000393449 2127 ntTSL 5 BASIC30.37■■■□□ 2.45
SLC1A4P43007 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC30.36■■■□□ 2.45
SLC1A4P43007 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC30.36■■■□□ 2.45
SLC1A4P43007 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC30.36■■■□□ 2.45
SLC1A4P43007 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
SLC1A4P43007 AC016575.1-201ENST00000607026 382 ntBASIC30.35■■■□□ 2.45
SLC1A4P43007 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC30.35■■■□□ 2.45
SLC1A4P43007 CR559946.2-201ENST00000623684 991 ntBASIC30.35■■■□□ 2.45
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms