Protein–RNA interactions for Protein: P35542

SAA4, Serum amyloid A-4 protein, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA4P35542 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SAA4P35542 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC21.37■■□□□ 1.01
SAA4P35542 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC21.37■■□□□ 1.01
SAA4P35542 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SAA4P35542 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SAA4P35542 AC021231.2-201ENST00000594613 730 ntBASIC21.35■■□□□ 1.01
SAA4P35542 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC21.35■■□□□ 1.01
SAA4P35542 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
SAA4P35542 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SAA4P35542 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SAA4P35542 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SAA4P35542 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SAA4P35542 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SAA4P35542 MIR7108-201ENST00000614319 87 ntBASIC21.34■■□□□ 1.01
SAA4P35542 AC010864.1-201ENST00000609407 1511 ntBASIC21.34■■□□□ 1.01
SAA4P35542 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
SAA4P35542 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SAA4P35542 ZNRF2P2-203ENST00000454624 420 ntBASIC21.33■■□□□ 1.01
SAA4P35542 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SAA4P35542 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SAA4P35542 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC21.33■■□□□ 1
SAA4P35542 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC21.32■■□□□ 1
SAA4P35542 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SAA4P35542 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SAA4P35542 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SAA4P35542 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC21.29■■□□□ 1
SAA4P35542 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC21.29■■□□□ 1
SAA4P35542 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC21.28■■□□□ 1
SAA4P35542 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC21.28■■□□□ 1
SAA4P35542 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC21.28■■□□□ 1
SAA4P35542 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC21.27■■□□□ 1
SAA4P35542 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC21.27■■□□□ 1
SAA4P35542 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC21.27■■□□□ 1
SAA4P35542 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
SAA4P35542 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC21.26■□□□□ 0.99
SAA4P35542 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
SAA4P35542 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SAA4P35542 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC21.25■□□□□ 0.99
SAA4P35542 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC21.25■□□□□ 0.99
SAA4P35542 AL135925.1-201ENST00000605920 1701 ntBASIC21.25■□□□□ 0.99
SAA4P35542 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SAA4P35542 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
SAA4P35542 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SAA4P35542 EI24-212ENST00000615917 1407 ntTSL 2 BASIC21.24■□□□□ 0.99
SAA4P35542 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SAA4P35542 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
SAA4P35542 PVT1-219ENST00000523427 938 ntTSL 3 BASIC21.24■□□□□ 0.99
SAA4P35542 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC21.24■□□□□ 0.99
SAA4P35542 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC21.23■□□□□ 0.99
SAA4P35542 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SAA4P35542 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC21.23■□□□□ 0.99
SAA4P35542 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SAA4P35542 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SAA4P35542 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SAA4P35542 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SAA4P35542 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SAA4P35542 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SAA4P35542 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SAA4P35542 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SAA4P35542 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SAA4P35542 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SAA4P35542 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
SAA4P35542 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SAA4P35542 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SAA4P35542 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC21.19■□□□□ 0.98
SAA4P35542 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SAA4P35542 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
SAA4P35542 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
SAA4P35542 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC21.16■□□□□ 0.98
SAA4P35542 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SAA4P35542 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SAA4P35542 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SAA4P35542 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SAA4P35542 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC21.14■□□□□ 0.97
SAA4P35542 LINC01971-201ENST00000617888 1048 ntBASIC21.14■□□□□ 0.97
SAA4P35542 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SAA4P35542 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
SAA4P35542 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SAA4P35542 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC21.13■□□□□ 0.97
SAA4P35542 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SAA4P35542 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SAA4P35542 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SAA4P35542 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
SAA4P35542 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
SAA4P35542 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SAA4P35542 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SAA4P35542 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC21.1■□□□□ 0.97
SAA4P35542 CALM3-209ENST00000597743 577 ntTSL 4 BASIC21.1■□□□□ 0.97
SAA4P35542 AC127502.1-201ENST00000399971 1502 ntBASIC21.09■□□□□ 0.97
SAA4P35542 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
SAA4P35542 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SAA4P35542 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC21.09■□□□□ 0.97
SAA4P35542 ST7-205ENST00000393446 2114 ntTSL 5 BASIC21.09■□□□□ 0.97
SAA4P35542 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.09■□□□□ 0.97
SAA4P35542 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SAA4P35542 DUX4L11-201ENST00000611504 1267 ntBASIC21.08■□□□□ 0.97
SAA4P35542 DUX4L12-201ENST00000614593 1267 ntBASIC21.08■□□□□ 0.97
SAA4P35542 DUX4L14-201ENST00000621227 1267 ntBASIC21.08■□□□□ 0.97
SAA4P35542 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SAA4P35542 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms